Information for 6-TGCADGGCCDGGCAGC (Motif 15)

A C G T C T A G T A G C G T C A C G T A A C T G A C T G G T A C G T A C C A G T A C T G C T A G G T A C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A G T C G T A C G C T A A C T G A C T G A G T C G T A C G A C T A C G T A T C G A G T C C G T A
p-value:1e-10
log p-value:-2.378e+01
Information Content per bp:1.761
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.3 +/- 30.1bp
Average Position of motif in Background55.3 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.57
Offset:12
Orientation:forward strand
Alignment:TGCADGGCCDGGCAGC-
------------CAGCC
 A C G T C T A G T A G C G T C A C G T A A C T G A C T G G T A C G T A C C A G T A C T G C T A G G T A C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGCADGGCCDGGCAGC
-ACATGCCCGGGCAT-
 A C G T C T A G T A G C G T C A C G T A A C T G A C T G G T A C G T A C C A G T A C T G C T A G G T A C C G T A A C T G A G T C
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCADGGCCDGGCAGC
----NTGATTGACAGN
 A C G T C T A G T A G C G T C A C G T A A C T G A C T G G T A C G T A C C A G T A C T G C T A G G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGCADGGCCDGGCAGC-
-----TGAGTGACAGSC
 A C G T C T A G T A G C G T C A C G T A A C T G A C T G G T A C G T A C C A G T A C T G C T A G G T A C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCADGGCCDGGCAGC
----BTGABTGACAGS
 A C G T C T A G T A G C G T C A C G T A A C T G A C T G G T A C G T A C C A G T A C T G C T A G G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:TGCADGGCCDGGCAGC
----------NGAAGC
 A C G T C T A G T A G C G T C A C G T A A C T G A C T G G T A C G T A C C A G T A C T G C T A G G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:TGCADGGCCDGGCAGC
----------CACAGN
 A C G T C T A G T A G C G T C A C G T A A C T G A C T G G T A C G T A C C A G T A C T G C T A G G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:TGCADGGCCDGGCAGC-
-------VBTGWCAGCB
 A C G T C T A G T A G C G T C A C G T A A C T G A C T G G T A C G T A C C A G T A C T G C T A G G T A C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:TGCADGGCCDGGCAGC-----
----------GTCAGCANNTN
 A C G T C T A G T A G C G T C A C G T A A C T G A C T G G T A C G T A C C A G T A C T G C T A G G T A C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.50
Offset:10
Orientation:forward strand
Alignment:TGCADGGCCDGGCAGC-----
----------GACAGCTGCAG
 A C G T C T A G T A G C G T C A C G T A A C T G A C T G G T A C G T A C C A G T A C T G C T A G G T A C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G