Information for 3-TCACCTCTGT (Motif 13)

C G A T A G T C G C T A A G T C A G T C A G C T T A G C A C G T A C T G C G A T
Reverse Opposite:
C G T A A G T C C G T A A T C G C T G A C T A G A C T G C G A T C T A G C G T A
p-value:1e-10
log p-value:-2.477e+01
Information Content per bp:1.844
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif5.12%
Number of Background Sequences with motif332.6
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets51.4 +/- 27.7bp
Average Position of motif in Background50.5 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TCACCTCTGT-
---CCTTTGTT
 C G A T A G T C G C T A A G T C A G T C A G C T T A G C A C G T A C T G C G A T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCACCTCTGT
CTGACCTTTG-
 A C G T C G A T A G T C G C T A A G T C A G T C A G C T T A G C A C G T A C T G C G A T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCACCTCTGT---
---CCTTTGTTTT
 C G A T A G T C G C T A A G T C A G T C A G C T T A G C A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCACCTCTGT-----
TGACCTTTGCCCTAN
 C G A T A G T C G C T A A G T C A G T C A G C T T A G C A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TCACCTCTGT
CNNTTGACCTTTG-
 A C G T A C G T A C G T A C G T C G A T A G T C G C T A A G T C A G T C A G C T T A G C A C G T A C T G C G A T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCACCTCTGT
TGACCYCT--
 C G A T A G T C G C T A A G T C A G T C A G C T T A G C A C G T A C T G C G A T
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCACCTCTGT----
TGACCTTTGCCCTA
 C G A T A G T C G C T A A G T C A G T C A G C T T A G C A C G T A C T G C G A T A C G T A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCACCTCTGT-
---CCWTTGTY
 C G A T A G T C G C T A A G T C A G T C A G C T T A G C A C G T A C T G C G A T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCACCTCTGT
----CTTTGT
 C G A T A G T C G C T A A G T C A G T C A G C T T A G C A C G T A C T G C G A T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCACCTCTGT---
---CCWTTGTYYB
 C G A T A G T C G C T A A G T C A G T C A G C T T A G C A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G