Information for 23-ACRTGMCAATAAT (Motif 48)

C G T A A G T C C T G A A C G T C T A G G T A C A G T C C G T A C G T A A C G T C G T A C G T A A G C T
Reverse Opposite:
C T G A A C G T C G A T C G T A A C G T A C G T A C T G A C T G A G T C C G T A A G C T A C T G A C G T
p-value:1e-6
log p-value:-1.459e+01
Information Content per bp:1.915
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.6 +/- 22.4bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACRTGMCAATAAT
-GGTGCCAAGT--
 C G T A A G T C C T G A A C G T C T A G G T A C A G T C C G T A C G T A A C G T C G T A C G T A A G C T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.64
Offset:7
Orientation:forward strand
Alignment:ACRTGMCAATAAT-
-------AATAATT
 C G T A A G T C C T G A A C G T C T A G G T A C A G T C C G T A C G T A A C G T C G T A C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ACRTGMCAATAAT
----GACAATGNN
 C G T A A G T C C T G A A C G T C T A G G T A C A G T C C G T A C G T A A C G T C G T A C G T A A G C T
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACRTGMCAATAAT
AAAGACCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C G T C T A G G T A C A G T C C G T A C G T A A C G T C G T A C G T A A G C T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACRTGMCAATAAT
-CGTGCCAAG---
 C G T A A G T C C T G A A C G T C T A G G T A C A G T C C G T A C G T A A C G T C G T A C G T A A G C T
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACRTGMCAATAAT----
ATGGTTCAATAATTTTG
 C G T A A G T C C T G A A C G T C T A G G T A C A G T C C G T A C G T A A C G T C G T A C G T A A G C T A C G T A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACRTGMCAATAAT
AATTACCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C G T C T A G G T A C A G T C C G T A C G T A A C G T C G T A C G T A A G C T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACRTGMCAATAAT
ATATGCAAATNNN
 C G T A A G T C C T G A A C G T C T A G G T A C A G T C C G T A C G T A A C G T C G T A C G T A A G C T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACRTGMCAATAAT
---TGCCAA----
 C G T A A G T C C T G A A C G T C T A G G T A C A G T C C G T A C G T A A C G T C G T A C G T A A G C T
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACRTGMCAATAAT
ARNTGACA-----
 C G T A A G T C C T G A A C G T C T A G G T A C A G T C C G T A C G T A A C G T C G T A C G T A A G C T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T