Information for 3-GCATTCTGGG (Motif 4)

C T A G T A G C C T G A A G C T A C G T A T G C A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C G T C A T A C G T G C A T C G A A G C T A C T G A G T C
p-value:1e-20
log p-value:-4.631e+01
Information Content per bp:1.849
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.29%
Number of Background Sequences with motif138.0
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets50.8 +/- 25.9bp
Average Position of motif in Background49.4 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GCATTCTGGG----
RGSMTBCTGGGAAAT
 A C G T C T A G T A G C C T G A A G C T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----GCATTCTGGG--
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T C T A G T A G C C T G A A G C T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCATTCTGGG---
TCNCCTGCTGNGNNN
 A C G T A C G T C T A G T A G C C T G A A G C T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCATTCTGGG----------
GCATTCTGGGAATTGTAGTT
 C T A G T A G C C T G A A G C T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCATTCTGGG---
NNTCCTGCTGTGNNN
 A C G T A C G T C T A G T A G C C T G A A G C T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCATTCTGGG--
--WDNCTGGGCA
 C T A G T A G C C T G A A G C T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCATTCTGGG---
TNTCCTGCTGTGNNG
 A C G T A C G T C T A G T A G C C T G A A G C T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCATTCTGGG-
-CCTGCTGAGH
 C T A G T A G C C T G A A G C T A C G T A T G C A C G T A C T G A C T G A C T G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCATTCTGGG----------
GCMTBCTGGGAGTTGTAGTY
 C T A G T A G C C T G A A G C T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCATTCTGGG----
---TTCTTGGAAAN
 C T A G T A G C C T G A A G C T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T