Information for 10-GCAGAGTATCAAC (Motif 23)

C T A G A G T C C G T A A T C G C G T A A C T G A C G T C G T A A C G T A G T C C G T A C T G A A T G C
Reverse Opposite:
A T C G A G C T G C A T A C T G C G T A A C G T C G T A A G T C C G A T A T G C A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.267e+01
Information Content per bp:1.838
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.6 +/- 20.9bp
Average Position of motif in Background34.5 +/- 5.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GCAGAGTATCAAC
--AATGTATCAAT
 C T A G A G T C C G T A A T C G C G T A A C T G A C G T C G T A A C G T A G T C C G T A C T G A A T G C
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCAGAGTATCAAC
GHTACAWTGTADCHR-
 A C G T A C G T A C G T C T A G A G T C C G T A A T C G C G T A A C T G A C G T C G T A A C G T A G T C C G T A C T G A A T G C
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCAGAGTATCAAC
GHWACAWTGTWDCWA-
 A C G T A C G T A C G T C T A G A G T C C G T A A T C G C G T A A C T G A C G T C G T A A C G T A G T C C G T A C T G A A T G C
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCAGAGTATCAAC---
AATAGGGTATCAATATT
 A C G T C T A G A G T C C G T A A T C G C G T A A C T G A C G T C G T A A C G T A G T C C G T A C T G A A T G C A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCAGAGTATCAAC
--AGGGTAACAGC
 C T A G A G T C C G T A A T C G C G T A A C T G A C G T C G T A A C G T A G T C C G T A C T G A A T G C
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PB0105.1_Arid3a_2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCAGAGTATCAAC---
-ACCCGTATCAAATTT
 C T A G A G T C C G T A A T C G C G T A A C T G A C G T C G T A A C G T A G T C C G T A C T G A A T G C A C G T A C G T A C G T
A C G T G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCAGAGTATCAAC---
AATAGGGTATCAATTAT
 A C G T C T A G A G T C C G T A A T C G C G T A A C T G A C G T C G T A A C G T A G T C C G T A C T G A A T G C A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Six3/MA0631.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCAGAGTATCAAC---
GATAGGGTATCACTAAT
 A C G T C T A G A G T C C G T A A T C G C G T A A C T G A C G T C G T A A C G T A G T C C G T A C T G A A T G C A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCAGAGTATCAAC---
GATAGGGTATCACTAAT
 A C G T C T A G A G T C C G T A A T C G C G T A A C T G A C G T C G T A A C G T A G T C C G T A C T G A A T G C A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCAGAGTATCAAC-
ATTTACAGTAGCAAAA
 A C G T A C G T C T A G A G T C C G T A A T C G C G T A A C T G A C G T C G T A A C G T A G T C C G T A C T G A A T G C A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A