Information for 5-TTATGTGTTG (Motif 12)

A G C T C A G T C T G A G A C T A T C G A G C T A T C G A G C T C A G T A T C G
Reverse Opposite:
T A G C G T C A C T G A A T G C C T G A A T G C C T G A A G C T G T C A T C G A
p-value:1e-13
log p-value:-3.002e+01
Information Content per bp:1.715
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif6.11%
Number of Background Sequences with motif584.1
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets48.2 +/- 27.8bp
Average Position of motif in Background48.1 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTATGTGTTG--
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A G C T C A G T C T G A G A C T A T C G A G C T A T C G A G C T C A G T A T C G A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTATGTGTTG-----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A G C T C A G T C T G A G A C T A T C G A G C T A T C G A G C T C A G T A T C G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTATGTGTTG-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A G C T C A G T C T G A G A C T A T C G A G C T A T C G A G C T C A G T A T C G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTATGTGTTG--
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A G C T C A G T C T G A G A C T A T C G A G C T A T C G A G C T C A G T A T C G A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTATGTGTTG
TTCTTATCTGT--
 A C G T A C G T A C G T A G C T C A G T C T G A G A C T A T C G A G C T A T C G A G C T C A G T A T C G
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTATGTGTTG
CCTTTGTTTT-
 A C G T A G C T C A G T C T G A G A C T A T C G A G C T A T C G A G C T C A G T A T C G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTATGTGTTG--
NNHTGTGGTTWN
 A G C T C A G T C T G A G A C T A T C G A G C T A T C G A G C T C A G T A T C G A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTATGTGTTG
TTAAGTGCTT
 A G C T C A G T C T G A G A C T A T C G A G C T A T C G A G C T C A G T A T C G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTATGTGTTG
TTAAGTGGT-
 A G C T C A G T C T G A G A C T A T C G A G C T A T C G A G C T C A G T A T C G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TTATGTGTTG
NNNCCATTGTGTNAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A G T C T G A G A C T A T C G A G C T A T C G A G C T C A G T A T C G
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T