Information for 6-MATGAGGCTGACCWMA (Motif 10)

G T A C G T C A G A C T C T A G C T G A T A C G A T C G A T G C A C G T A C T G G T C A A G T C A G T C C G A T T G C A C G T A
Reverse Opposite:
C G A T A C G T C G T A C T A G C T A G A C G T A G T C C G T A A T C G T A G C A T G C A G C T G A T C C T G A A C G T A C T G
p-value:1e-13
log p-value:-3.062e+01
Information Content per bp:1.747
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.1 +/- 29.8bp
Average Position of motif in Background53.2 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.66
Offset:8
Orientation:reverse strand
Alignment:MATGAGGCTGACCWMA
--------TGACCTYA
 G T A C G T C A G A C T C T A G C T G A T A C G A T C G A T G C A C G T A C T G G T C A A G T C A G T C C G A T T G C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:MATGAGGCTGACCWMA
--------TGACCT--
 G T A C G T C A G A C T C T A G C T G A T A C G A T C G A T G C A C G T A C T G G T C A A G T C A G T C C G A T T G C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:MATGAGGCTGACCWMA
--------TGACCYCT
 G T A C G T C A G A C T C T A G C T G A T A C G A T C G A T G C A C G T A C T G G T C A A G T C A G T C C G A T T G C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:MATGAGGCTGACCWMA-
-----NRRTGACGTCAT
 G T A C G T C A G A C T C T A G C T G A T A C G A T C G A T G C A C G T A C T G G T C A A G T C A G T C C G A T T G C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:MATGAGGCTGACCWMA--
--------TGACCTARTT
 G T A C G T C A G A C T C T A G C T G A T A C G A T C G A T G C A C G T A C T G G T C A A G T C A G T C C G A T T G C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:MATGAGGCTGACCWMA
-------GTGACCTT-
 G T A C G T C A G A C T C T A G C T G A T A C G A T C G A T G C A C G T A C T G G T C A A G T C A G T C C G A T T G C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:MATGAGGCTGACCWMA-
-----NGRTGACGTCAY
 G T A C G T C A G A C T C T A G C T G A T A C G A T C G A T G C A C G T A C T G G T C A A G T C A G T C C G A T T G C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:MATGAGGCTGACCWMA--
--------TGACCTTGAT
 G T A C G T C A G A C T C T A G C T G A T A C G A T C G A T G C A C G T A C T G G T C A A G T C A G T C C G A T T G C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:MATGAGGCTGACCWMA
------GATGACGTCA
 G T A C G T C A G A C T C T A G C T G A T A C G A T C G A T G C A C G T A C T G G T C A A G T C A G T C C G A T T G C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:MATGAGGCTGACCWMA
--TGACCTTGACCT--
 G T A C G T C A G A C T C T A G C T G A T A C G A T C G A T G C A C G T A C T G G T C A A G T C A G T C C G A T T G C A C G T A
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T