Information for 1-TKCTGGGAVTTGTAGT (Motif 1)

A G C T A C T G T A G C G A C T A C T G A C T G T A C G T C G A T C G A C G A T G A C T C T A G C G A T C T G A A C T G A G C T
Reverse Opposite:
C T G A A G T C A G C T G C T A A G T C C T G A G C T A A G C T A G C T A G T C T A G C A G T C C T G A A T C G T G A C T C G A
p-value:1e-44
log p-value:-1.022e+02
Information Content per bp:1.690
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif6.93%
Number of Background Sequences with motif110.9
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets50.8 +/- 25.3bp
Average Position of motif in Background47.7 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:1
Score:0.93
Offset:-3
Orientation:reverse strand
Alignment:---TKCTGGGAVTTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A G C T A C T G T A G C G A C T A C T G A C T G T A C G T C G A T C G A C G A T G A C T C T A G C G A T C T G A A C T G A G C T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.91
Offset:4
Orientation:reverse strand
Alignment:TKCTGGGAVTTGTAGT
----GGGAATTGTAGT
 A G C T A C T G T A G C G A C T A C T G A C T G T A C G T C G A T C G A C G A T G A C T C T A G C G A T C T G A A C T G A G C T
A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---TKCTGGGAVTTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A G C T A C T G T A G C G A C T A C T G A C T G T A C G T C G A T C G A C G A T G A C T C T A G C G A T C T G A A C T G A G C T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TKCTGGGAVTTGTAGT
RGSMTBCTGGGAAAT-----
 A C G T A C G T A C G T A C G T A G C T A C T G T A G C G A C T A C T G A C T G T A C G T C G A T C G A C G A T G A C T C T A G C G A T C T G A A C T G A G C T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TKCTGGGAVTTGTAGT
CTTCTGGGAAA------
 A C G T A G C T A C T G T A G C G A C T A C T G A C T G T A C G T C G A T C G A C G A T G A C T C T A G C G A T C T G A A C T G A G C T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TKCTGGGAVTTGTAGT---
-------NNHTGTGGTTWN
 A G C T A C T G T A G C G A C T A C T G A C T G T A C G T C G A T C G A C G A T G A C T C T A G C G A T C T G A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:TKCTGGGAVTTGTAGT---
---------CTGTGGTTTN
 A G C T A C T G T A G C G A C T A C T G A C T G T A C G T C G A T C G A C G A T G A C T C T A G C G A T C T G A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TKCTGGGAVTTGTAGT
-CSTGGGAAAD-----
 A G C T A C T G T A G C G A C T A C T G A C T G T A C G T C G A T C G A C G A T G A C T C T A G C G A T C T G A A C T G A G C T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TKCTGGGAVTTGTAGT
TTTCCAGGAAA------
 A C G T A G C T A C T G T A G C G A C T A C T G A C T G T A C G T C G A T C G A C G A T G A C T C T A G C G A T C T G A A C T G A G C T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TKCTGGGAVTTGTAGT----
----GNNATTTGTCGTAANN
 A G C T A C T G T A G C G A C T A C T G A C T G T A C G T C G A T C G A C G A T G A C T C T A G C G A T C T G A A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T