Information for 9-AAATGGAGGMGCT (Motif 13)

C T G A C G T A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A A C T G A G T C A G C T
Reverse Opposite:
C T G A A C T G A G T C A C G T A G T C A G T C A C G T A G T C A G T C G T C A C G A T C G A T A G C T
p-value:1e-9
log p-value:-2.122e+01
Information Content per bp:1.833
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.1 +/- 22.5bp
Average Position of motif in Background49.7 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAATGGAGGMGCT-
AGGGGGCGGGGCTG
 C T G A C G T A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A A C T G A G T C A G C T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAATGGAGGMGCT
TAATGGCGGNC--
 C T G A C G T A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A A C T G A G T C A G C T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAATGGAGGMGCT
RGKGGGCGGAGC-
 C T G A C G T A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A A C T G A G T C A G C T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAATGGAGGMGCT
--GGGGNGGGGC-
 C T G A C G T A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A A C T G A G T C A G C T
A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAATGGAGGMGCT-
NNVDGGGYGGGGCYN
 A C G T C T G A C G T A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A A C T G A G T C A G C T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAATGGAGGMGCT
CAAGATGGCGGC---
 A C G T A C G T C T G A C G T A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A A C T G A G T C A G C T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAATGGAGGMGCT
-GGGGGCGGGGC-
 C T G A C G T A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A A C T G A G T C A G C T
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAATGGAGGMGCT--
NAGANTGGCGGGGNGNA
 A C G T A C G T C T G A C G T A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A A C T G A G T C A G C T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AAATGGAGGMGCT
------CGGAGC-
 C T G A C G T A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A A C T G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAATGGAGGMGCT
---GGGAGGACNG
 C T G A C G T A C G T A A C G T A C T G A C T G G T C A A C T G A C T G G T C A A C T G A G T C A G C T
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G