Information for 9-CCCTGGGAAC (Motif 23)

A T G C A G T C G T A C A C G T A T C G C A T G C T A G T G C A T C G A A G T C
Reverse Opposite:
T C A G A G C T A C G T A G T C G A T C A T G C G T C A A C T G C T A G A T C G
p-value:1e-7
log p-value:-1.767e+01
Information Content per bp:1.818
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.31%
Number of Background Sequences with motif690.1
Percentage of Background Sequences with motif1.47%
Average Position of motif in Targets50.7 +/- 24.4bp
Average Position of motif in Background49.2 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGGAAC
TCCCCTGGGGAC
 A C G T A C G T A T G C A G T C G T A C A C G T A T C G C A T G C T A G T G C A T C G A A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CCCTGGGAAC-
-CSTGGGAAAD
 A T G C A G T C G T A C A C G T A T C G C A T G C T A G T G C A T C G A A G T C A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CCCTGGGAAC
WDNCTGGGCA-
 A C G T A T G C A G T C G T A C A C G T A T C G C A T G C T A G T G C A T C G A A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CCCTGGGAAC
GTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A T G C A G T C G T A C A C G T A T C G C A T G C T A G T G C A T C G A A G T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGGAAC-
TCCCNNGGGACN
 A C G T A T G C A G T C G T A C A C G T A T C G C A T G C T A G T G C A T C G A A G T C A C G T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGAAC-
TTGCCATGGCAACN
 A C G T A C G T A C G T A T G C A G T C G T A C A C G T A T C G C A T G C T A G T G C A T C G A A G T C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCCTGGGAAC--
SCCTAGCAACAG
 A T G C A G T C G T A C A C G T A T C G C A T G C T A G T G C A T C G A A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGAAC-
TTGCCATGGCAACC
 A C G T A C G T A C G T A T G C A G T C G T A C A C G T A T C G C A T G C T A G T G C A T C G A A G T C A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

EBF1/MA0154.3/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCCTGGGAAC
ATTCCCAAGGGAAT
 A C G T A C G T A C G T A C G T A T G C A G T C G T A C A C G T A T C G C A T G C T A G T G C A T C G A A G T C
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTGGGAAC
KGTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T A C A C G T A T C G C A T G C T A G T G C A T C G A A G T C
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C