Information for 7-GAGCACAGGC (Motif 20)

C T A G C G T A A T C G T A G C T G C A A T G C G T C A A C T G C A T G A G T C
Reverse Opposite:
T C A G G T A C A G T C A C G T A T C G A C G T A T C G T A G C C G A T A G T C
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.826
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif699.5
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets52.0 +/- 23.2bp
Average Position of motif in Background50.6 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GAGCACAGGC
---CACAGN-
C T A G C G T A A T C G T A G C T G C A A T G C G T C A A C T G C A T G A G T C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCACAGGC--
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T C G T A G C T G C A A T G C G T C A A C T G C A T G A G T C A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAGCACAGGC
AAACCACAGC-
A C G T C T A G C G T A A T C G T A G C T G C A A T G C G T C A A C T G C A T G A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAGCACAGGC
AAACCACAGAN
A C G T C T A G C G T A A T C G T A G C T G C A A T G C G T C A A C T G C A T G A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGCACAGGC
GGGAGGACNG--
A C G T A C G T C T A G C G T A A T C G T A G C T G C A A T G C G T C A A C T G C A T G A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGCACAGGC
NAAACCACAG--
A C G T A C G T C T A G C G T A A T C G T A G C T G C A A T G C G T C A A C T G C A T G A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGCACAGGC
NWAACCACADNN
A C G T A C G T C T A G C G T A A T C G T A G C T G C A A T G C G T C A A C T G C A T G A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGCACAGGC
CCAGGAACAG--
A C G T A C G T C T A G C G T A A T C G T A G C T G C A A T G C G T C A A C T G C A T G A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGCACAGGC-
-TGCCCAGNHW
C T A G C G T A A T C G T A G C T G C A A T G C G T C A A C T G C A T G A G T C A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAGCACAGGC---
NANAGATCAAAGGGNNN
A C G T A C G T A C G T A C G T C T A G C G T A A T C G T A G C T G C A A T G C G T C A A C T G C A T G A G T C A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T