Information for 10-AGGGTGGCTGCAT (Motif 13)

C T G A A C T G A C T G A T C G A C G T A C T G A C T G A G T C A C G T C T A G A G T C C G T A A C G T
Reverse Opposite:
G T C A C G A T A C T G A G T C C G T A A C T G A G T C A G T C C G T A A T G C A G T C A G T C A G C T
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.5 +/- 28.2bp
Average Position of motif in Background44.8 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGGGTGGCTGCAT
---TWGTCTGV--
 C T G A A C T G A C T G A T C G A C G T A C T G A C T G A G T C A C G T C T A G A G T C C G T A A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTGGCTGCAT
CAGTGTGGTCGC--
 A C G T C T G A A C T G A C T G A T C G A C G T A C T G A C T G A G T C A C G T C T A G A G T C C G T A A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGGGTGGCTGCAT
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T C T G A A C T G A C T G A T C G A C G T A C T G A C T G A G T C A C G T C T A G A G T C C G T A A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGGTGGCTGCAT
CAAGATGGCGGC--
 A C G T C T G A A C T G A C T G A T C G A C G T A C T G A C T G A G T C A C G T C T A G A G T C C G T A A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGGGTGGCTGCAT
GTCATGCHTGRCTGS--
 A C G T A C G T A C G T A C G T C T G A A C T G A C T G A T C G A C G T A C T G A C T G A G T C A C G T C T A G A G T C C G T A A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGGTGGCTGCAT
AGGGTAACAGC--
 C T G A A C T G A C T G A T C G A C G T A C T G A C T G A G T C A C G T C T A G A G T C C G T A A C G T
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGGTGGCTGCAT
CAAGATGGCGGC--
 A C G T C T G A A C T G A C T G A T C G A C G T A C T G A C T G A G T C A C G T C T A G A G T C C G T A A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGGGTGGCTGCAT
-----NGCTN---
 C T G A A C T G A C T G A T C G A C G T A C T G A C T G A G T C A C G T C T A G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTGGCTGCAT
NTCGGTGGTCGC--
 A C G T C T G A A C T G A C T G A T C G A C G T A C T G A C T G A G T C A C G T C T A G A G T C C G T A A C G T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGGGTGGCTGCAT
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T C T G A A C T G A C T G A T C G A C G T A C T G A C T G A G T C A C G T C T A G A G T C C G T A A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T