Information for 2-GGAAAGCCAT (Motif 11)

C A T G T A C G T G C A T C G A C T G A A T C G T A G C A G T C T C G A C A G T
Reverse Opposite:
G T C A A G C T C T A G A T C G T A G C G A C T A C G T A C G T A T G C G T A C
p-value:1e-10
log p-value:-2.407e+01
Information Content per bp:1.666
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif8.97%
Number of Background Sequences with motif1820.2
Percentage of Background Sequences with motif3.87%
Average Position of motif in Targets50.6 +/- 27.7bp
Average Position of motif in Background49.9 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGAAAGCCAT
GGAAANCCCC
 C A T G T A C G T G C A T C G A C T G A A T C G T A G C A G T C T C G A C A G T
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGCCAT
NNTGGAAANN---
 A C G T A C G T A C G T C A T G T A C G T G C A T C G A C T G A A T C G T A G C A G T C T C G A C A G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGAAAGCCAT
GGAAATTCCC
 C A T G T A C G T G C A T C G A C T G A A T C G T A G C A G T C T C G A C A G T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGCCAT
AATGGAAAAT---
 A C G T A C G T A C G T C A T G T A C G T G C A T C G A C T G A A T C G T A G C A G T C T C G A C A G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAAAGCCAT
GGAAATCCCC
 C A T G T A C G T G C A T C G A C T G A A T C G T A G C A G T C T C G A C A G T
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAGCCAT----
AGGGAAGTCATTTCT
 A C G T C A T G T A C G T G C A T C G A C T G A A T C G T A G C A G T C T C G A C A G T A C G T A C G T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAGCCAT
TGGAAAA----
 A C G T C A T G T A C G T G C A T C G A C T G A A T C G T A G C A G T C T C G A C A G T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGCCAT
NATGGAAAAN---
 A C G T A C G T A C G T C A T G T A C G T G C A T C G A C T G A A T C G T A G C A G T C T C G A C A G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAGCCAT-
GGGAAATCCCCN
 A C G T C A T G T A C G T G C A T C G A C T G A A T C G T A G C A G T C T C G A C A G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGAAAGCCAT
---CAGCC--
 C A T G T A C G T G C A T C G A C T G A A T C G T A G C A G T C T C G A C A G T
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T