Information for 4-GGGCAGSMGGGCTGMR (Motif 6)

A C T G C T A G A C T G A G T C C G T A A C T G A T G C G T C A A C T G A C T G A C T G A G T C A C G T A C T G G T C A C T A G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A T C G A G T C C G A T A C T G A G T C A G T C A G T C
p-value:1e-11
log p-value:-2.653e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.4 +/- 14.9bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGSMGGGCTGMR
TNNGGGCAG----------
 A C G T A C G T A C G T A C T G C T A G A C T G A G T C C G T A A C T G A T G C G T C A A C T G A C T G A C T G A G T C A C G T A C T G G T C A C T A G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGGCAGSMGGGCTGMR
SDGCAGGTGCNS----
 A C T G C T A G A C T G A G T C C G T A A C T G A T G C G T C A A C T G A C T G A C T G A G T C A C G T A C T G G T C A C T A G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGSMGGGCTGMR
NGTGGGCAT----------
 A C G T A C G T A C G T A C T G C T A G A C T G A G T C C G T A A C T G A T G C G T C A A C T G A C T G A C T G A G T C A C G T A C T G G T C A C T A G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGGCAGSMGGGCTGMR
TGGCAGNCTGCCAG--
 A C T G C T A G A C T G A G T C C G T A A C T G A T G C G T C A A C T G A C T G A C T G A G T C A C G T A C T G G T C A C T A G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GGGCAGSMGGGCTGMR
---------NGCTN--
 A C T G C T A G A C T G A G T C C G T A A C T G A T G C G T C A A C T G A C T G A C T G A G T C A C G T A C T G G T C A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGGCAGSMGGGCTGMR
DCHCAGCAGGRGGCC-
 A C T G C T A G A C T G A G T C C G T A A C T G A T G C G T C A A C T G A C T G A C T G A G T C A C G T A C T G G T C A C T A G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAGSMGGGCTGMR
NNAGGGACAAGGGCNC--
 A C G T A C G T A C T G C T A G A C T G A G T C C G T A A C T G A T G C G T C A A C T G A C T G A C T G A G T C A C G T A C T G G T C A C T A G
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAGSMGGGCTGMR
NNNNTTGGGCACNNCN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A G T C C G T A A C T G A T G C G T C A A C T G A C T G A C T G A G T C A C G T A C T G G T C A C T A G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GGGCAGSMGGGCTGMR
-CGCAGCTGCG-----
 A C T G C T A G A C T G A G T C C G T A A C T G A T G C G T C A A C T G A C T G A C T G A G T C A C G T A C T G G T C A C T A G
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGGCAGSMGGGCTGMR
-GACAGCTGCAG----
 A C T G C T A G A C T G A G T C C G T A A C T G A T G C G T C A A C T G A C T G A C T G A G T C A C G T A C T G G T C A C T A G
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T