Information for 13-SAGGGCAGATCWGCCC (Motif 26)

A T G C C T G A A C T G A C T G A C T G A G T C C G T A A C T G C G T A G A C T A G T C C G T A A C T G A G T C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G A G T C C G A T A C T G C G T A A C G T A G T C C G A T A C T G A G T C A G T C G T A C A G C T A T C G
p-value:1e-7
log p-value:-1.781e+01
Information Content per bp:1.810
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.6 +/- 14.3bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-SAGGGCAGATCWGCCC
TNNGGGCAG--------
 A C G T A T G C C T G A A C T G A C T G A C T G A G T C C G T A A C T G C G T A G A C T A G T C C G T A A C T G A G T C A G T C G T A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:SAGGGCAGATCWGCCC---
-----NAGCCCCGCCCCCN
 A T G C C T G A A C T G A C T G A C T G A G T C C G T A A C T G C G T A G A C T A G T C C G T A A C T G A G T C A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:SAGGGCAGATCWGCCC---
-------GCTCCGCCCMCY
 A T G C C T G A A C T G A C T G A C T G A G T C C G T A A C T G C G T A G A C T A G T C C G T A A C T G A G T C A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:SAGGGCAGATCWGCCC
-AGGTCACCCTGACCT
 A T G C C T G A A C T G A C T G A C T G A G T C C G T A A C T G C G T A G A C T A G T C C G T A A C T G A G T C A G T C G T A C
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:forward strand
Alignment:SAGGGCAGATCWGCCC--
------GGCCCCGCCCCC
 A T G C C T G A A C T G A C T G A C T G A G T C C G T A A C T G C G T A G A C T A G T C C G T A A C T G A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----SAGGGCAGATCWGCCC
NNNNTTGGGCACNNCN----
 A C G T A C G T A C G T A C G T A T G C C T G A A C T G A C T G A C T G A G T C C G T A A C T G C G T A G A C T A G T C C G T A A C T G A G T C A G T C G T A C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-SAGGGCAGATCWGCCC
NGTGGGCAT--------
 A C G T A T G C C T G A A C T G A C T G A C T G A G T C C G T A A C T G C G T A G A C T A G T C C G T A A C T G A G T C A G T C G T A C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.49
Offset:7
Orientation:forward strand
Alignment:SAGGGCAGATCWGCCC------
-------GCCCCGCCCCCTCCC
 A T G C C T G A A C T G A C T G A C T G A G T C C G T A A C T G C G T A G A C T A G T C C G T A A C T G A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--SAGGGCAGATCWGCCC
CAAAGGTCAG--------
 A C G T A C G T A T G C C T G A A C T G A C T G A C T G A G T C C G T A A C T G C G T A G A C T A G T C C G T A A C T G A G T C A G T C G T A C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:SAGGGCAGATCWGCCC------
------ATCCCCGCCCCTAAAA
 A T G C C T G A A C T G A C T G A C T G A G T C C G T A A C T G C G T A G A C T A G T C C G T A A C T G A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A