Information for 12-AACAGGCCCTTCA (Motif 15)

T G C A C T G A T A G C C G T A C T A G T A C G G T A C G A T C G A T C A C G T C A G T G T A C C G T A
Reverse Opposite:
A C G T A C T G G T C A G T C A C T A G C T A G A C T G A T G C G A T C G C A T A T C G G A C T A C G T
p-value:1e-9
log p-value:-2.260e+01
Information Content per bp:1.650
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 19.2bp
Average Position of motif in Background58.2 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AACAGGCCCTTCA
AGCAACAGCCGCACC-
 A C G T A C G T A C G T T G C A C T G A T A G C C G T A C T A G T A C G G T A C G A T C G A T C A C G T C A G T G T A C C G T A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AACAGGCCCTTCA
---AASCACTCAA
 T G C A C T G A T A G C C G T A C T A G T A C G G T A C G A T C G A T C A C G T C A G T G T A C C G T A
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AACAGGCCCTTCA-
----NSCACTYVAV
 T G C A C T G A T A G C C G T A C T A G T A C G G T A C G A T C G A T C A C G T C A G T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AACAGGCCCTTCA-
GVACAGNMTGTYCTB
 A C G T T G C A C T G A T A G C C G T A C T A G T A C G G T A C G A T C G A T C A C G T C A G T G T A C C G T A A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AACAGGCCCTTCA
--AAGACCCYYN-
 T G C A C T G A T A G C C G T A C T A G T A C G G T A C G A T C G A T C A C G T C A G T G T A C C G T A
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AACAGGCCCTTCA-
----RSCACTYRAG
 T G C A C T G A T A G C C G T A C T A G T A C G G T A C G A T C G A T C A C G T C A G T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AACAGGCCCTTCA----
-TAAGCCACTTGAAATT
 T G C A C T G A T A G C C G T A C T A G T A C G G T A C G A T C G A T C A C G T C A G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AACAGGCCCTTCA-
-----CCACTTGAA
 T G C A C T G A T A G C C G T A C T A G T A C G G T A C G A T C G A T C A C G T C A G T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AACAGGCCCTTCA----
-TAAGCCACTTGAAATT
 T G C A C T G A T A G C C G T A C T A G T A C G G T A C G A T C G A T C A C G T C A G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AACAGGCCCTTCA-
GACCACGCCCTTATT
 A C G T T G C A C T G A T A G C C G T A C T A G T A C G G T A C G A T C G A T C A C G T C A G T G T A C C G T A A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T