Information for 10-TGASAKKMAGACT (Motif 13)

A C G T A C T G C G T A A T C G C G T A A C T G A C G T G T A C C G T A A C T G C G T A A T G C C G A T
Reverse Opposite:
C G T A A T C G C G A T A G T C A C G T A C T G G T C A G T A C A C G T A T G C A C G T A G T C C G T A
p-value:1e-10
log p-value:-2.431e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 20.9bp
Average Position of motif in Background53.4 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGASAKKMAGACT
TTGACAGG------
 A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C G T G T A C C G T A A C T G C G T A A T G C C G A T
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TGASAKKMAGACT-
------BCAGACWA
 A C G T A C T G C G T A A T C G C G T A A C T G A C G T G T A C C G T A A C T G C G T A A T G C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGASAKKMAGACT
TTGACAG-------
 A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C G T G T A C C G T A A C T G C G T A A T G C C G A T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGASAKKMAGACT
TTGACAGC------
 A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C G T G T A C C G T A A C T G C G T A A T G C C G A T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGASAKKMAGACT
TGAGTGACAGSC-
 A C G T A C T G C G T A A T C G C G T A A C T G A C G T G T A C C G T A A C T G C G T A A T G C C G A T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGASAKKMAGACT
VBTGWCAGCB-----
 A C G T A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C G T G T A C C G T A A C T G C G T A A T G C C G A T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGASAKKMAGACT
RHTGWCAR-------
 A C G T A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C G T G T A C C G T A A C T G C G T A A T G C C G A T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGASAKKMAGACT
-AGGTGHCAGACA
 A C G T A C T G C G T A A T C G C G T A A C T G A C G T G T A C C G T A A C T G C G T A A T G C C G A T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGASAKKMAGACT---
------CCAGACRSVB
 A C G T A C T G C G T A A T C G C G T A A C T G A C G T G T A C C G T A A C T G C G T A A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGASAKKMAGACT-
------CCAGACAG
 A C G T A C T G C G T A A T C G C G T A A C T G A C G T G T A C C G T A A C T G C G T A A T G C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G