Information for 7-GTAAATTACT (Motif 29)

A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A G C T
Reverse Opposite:
C T G A A C T G A C G T C G T A C G T A C G A T A C G T A C G T C G T A A G T C
p-value:1e-3
log p-value:-8.789e+00
Information Content per bp:1.925
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets81.0 +/- 10.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0053.1_Hoxa6/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTAAATTACT----
AAGGTAATTACCTAAT
 A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A G C T A C G T A C G T A C G T A C G T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTAAATTACT
GGAAATTCCC
 A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A G C T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PH0024.1_Dlx5/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTAAATTACT--
NANNGNTAATTACCNN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A G C T A C G T A C G T
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

PH0072.1_Hoxc8/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTAAATTACT----
ACNNTAATTACNNCAN
 A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A G C T A C G T A C G T A C G T A C G T
T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

PB0031.1_Hoxa3_1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTAAATTACT----
GTTAATTANCTCNN
 A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A G C T A C G T A C G T A C G T A C G T
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A

MEOX2/MA0706.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTAAATTACT
NTTAATTACN
 A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A G C T
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T

PH0054.1_Hoxa7_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTAAATTACT----
CGAGTTAATTAATAAGC
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A G C T A C G T A C G T A C G T A C G T
T A G C T C A G G T C A C T A G C A G T G A C T G C T A C G T A G C A T C G A T C T G A G T C A G A C T C G T A C G T A A C T G G T A C

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GTAAATTACT
---AATTATT
 A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A G C T
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T

RAX/MA0718.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTAAATTACT
GCCAATTAAC
 A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A G C T
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C

PH0020.1_Dlx1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAAATTACT----
ATTAATTANCTCAN
 A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A G C T A C G T A C G T A C G T A C G T
T C G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A G A T C G A T C A C G T A G T C C T G A T A C G