Information for 17-ACGTGCGATCCCG (Motif 27)

C G T A A T G C A T C G A C G T A T C G T A G C A C T G T G C A A G C T A T G C A T G C T A G C A C T G
Reverse Opposite:
G T A C A T C G A T C G A T C G T C G A A C G T T G A C A T C G A T G C T C G A A T G C T A C G G A C T
p-value:1e-6
log p-value:-1.389e+01
Information Content per bp:1.671
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif41.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets52.7 +/- 27.0bp
Average Position of motif in Background44.1 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACGTGCGATCCCG
RTACGTGC-------
 A C G T A C G T C G T A A T G C A T C G A C G T A T C G T A G C A C T G T G C A A G C T A T G C A T G C T A G C A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACGTGCGATCCCG
TACGTGCV------
 A C G T C G T A A T G C A T C G A C G T A T C G T A G C A C T G T G C A A G C T A T G C A T G C T A G C A C T G
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACGTGCGATCCCG
GGACGTGC-------
 A C G T A C G T C G T A A T G C A T C G A C G T A T C G T A G C A C T G T G C A A G C T A T G C A T G C T A G C A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ACGTGCGATCCCG
GGGTACGTGC-------
 A C G T A C G T A C G T A C G T C G T A A T G C A T C G A C G T A T C G T A G C A C T G T G C A A G C T A T G C A T G C T A G C A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGCGATCCCG
TCACGTGC-------
 A C G T A C G T C G T A A T G C A T C G A C G T A T C G T A G C A C T G T G C A A G C T A T G C A T G C T A G C A C T G
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACGTGCGATCCCG
CACGTG--------
 A C G T C G T A A T G C A T C G A C G T A T C G T A G C A C T G T G C A A G C T A T G C A T G C T A G C A C T G
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGCGATCCCG
ACACGTGC-------
 A C G T A C G T C G T A A T G C A T C G A C G T A T C G T A G C A C T G T G C A A G C T A T G C A T G C T A G C A C T G
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ACGTGCGATCCCG
NGKCACGTGM-------
 A C G T A C G T A C G T A C G T C G T A A T G C A T C G A C G T A T C G T A G C A C T G T G C A A G C T A T G C A T G C T A G C A C T G
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACGTGCGATCCCG
NACACGTGCN------
 A C G T A C G T A C G T C G T A A T G C A T C G A C G T A T C G T A G C A C T G T G C A A G C T A T G C A T G C T A G C A C T G
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACGTGCGATCCCG
NVCACGTG--------
 A C G T A C G T A C G T C G T A A T G C A T C G A C G T A T C G T A G C A C T G T G C A A G C T A T G C A T G C T A G C A C T G
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T