Information for 2-CTGCGTGCGT (Motif 20)

T A G C G C A T A T C G G T A C A C T G C G A T A C T G T A G C T C A G G A C T
Reverse Opposite:
C T G A A G T C A T C G T G A C G C T A T G A C C A T G T A G C C G T A A T C G
p-value:1e-7
log p-value:-1.712e+01
Information Content per bp:1.661
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif7.31%
Number of Background Sequences with motif1576.2
Percentage of Background Sequences with motif3.37%
Average Position of motif in Targets49.0 +/- 26.3bp
Average Position of motif in Background51.0 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTGCGTGCGT
TTGCGTGCVA
 T A G C G C A T A T C G G T A C A C T G C G A T A C T G T A G C T C A G G A C T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTGCGTGCGT
-TGCGTG---
 T A G C G C A T A T C G G T A C A C T G C G A T A C T G T A G C T C A G G A C T
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGCGTGCGT-
-TGCGTGGGYG
 T A G C G C A T A T C G G T A C A C T G C G A T A C T G T A G C T C A G G A C T A C G T
A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

EGR2/MA0472.2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGCGTGCGT--
-TGCGTGGGCGT
 T A G C G C A T A T C G G T A C A C T G C G A T A C T G T A G C T C A G G A C T A C G T A C G T
A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGCGTGCGT
-TACGTGCV-
 T A G C G C A T A T C G G T A C A C T G C G A T A C T G T A G C T C A G G A C T
A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGCGTGCGT
GGACGTGC--
 T A G C G C A T A T C G G T A C A C T G C G A T A C T G T A G C T C A G G A C T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGCGTGCGT----
ANTGCGTGGGCGTNN
 A C G T T A G C G C A T A T C G G T A C A C T G C G A T A C T G T A G C T C A G G A C T A C G T A C G T A C G T A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGCGTGCGT
RTACGTGC--
 T A G C G C A T A T C G G T A C A C T G C G A T A C T G T A G C T C A G G A C T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

EGR4/MA0733.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGCGTGCGT----
AANTGCGTGGGCGTNN
 A C G T A C G T T A G C G C A T A T C G G T A C A C T G C G A T A C T G T A G C T C A G G A C T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

PB0095.1_Zfp161_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGCGTGCGT--
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T T A G C G C A T A T C G G T A C A C T G C G A T A C T G T A G C T C A G G A C T A C G T A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A