Information for 7-CMGCCGCCAGGCAGGC (Motif 13)

A G T C G T C A C T A G A G T C A G T C T C A G A G T C A G T C C G T A A C T G A T C G A G T C G T C A C T A G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C T G A T G C A G T C C G A T A C T G A C T G A G T C C T A G T A C G A G T C A C G T C T A G
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.815
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.0 +/- 26.1bp
Average Position of motif in Background43.0 +/- 38.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CMGCCGCCAGGCAGGC
-CGCCCCCTGACA---
 A G T C G T C A C T A G A G T C A G T C T C A G A G T C A G T C C G T A A C T G A T C G A G T C G T C A C T A G A C T G G T A C
A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CMGCCGCCAGGCAGGC
-TGCCCCCGGGCA---
 A G T C G T C A C T A G A G T C A G T C T C A G A G T C A G T C C G T A A C T G A T C G A G T C G T C A C T A G A C T G G T A C
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CMGCCGCCAGGCAGGC
-TGCCCCAGGGCA---
 A G T C G T C A C T A G A G T C A G T C T C A G A G T C A G T C C G T A A C T G A T C G A G T C G T C A C T A G A C T G G T A C
A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CMGCCGCCAGGCAGGC
-TGCCCCAGGGCA---
 A G T C G T C A C T A G A G T C A G T C T C A G A G T C A G T C C G T A A C T G A T C G A G T C G T C A C T A G A C T G G T A C
A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CMGCCGCCAGGCAGGC---
----TCCCAGMCRAGCCCC
 A G T C G T C A C T A G A G T C A G T C T C A G A G T C A G T C C G T A A C T G A T C G A G T C G T C A C T A G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CMGCCGCCAGGCAGGC--
-------AAGGCAAGTGT
 A G T C G T C A C T A G A G T C A G T C T C A G A G T C A G T C C G T A A C T G A T C G A G T C G T C A C T A G A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CMGCCGCCAGGCAGGC-----
------SCAGYCADGCATGAC
 A G T C G T C A C T A G A G T C A G T C T C A G A G T C A G T C C G T A A C T G A T C G A G T C G T C A C T A G A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CMGCCGCCAGGCAGGC
CCGCCCAAGGGCAG--
 A G T C G T C A C T A G A G T C A G T C T C A G A G T C A G T C C G T A A C T G A T C G A G T C G T C A C T A G A C T G G T A C
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CMGCCGCCAGGCAGGC
------CCAGACAG--
 A G T C G T C A C T A G A G T C A G T C T C A G A G T C A G T C C G T A A C T G A T C G A G T C G T C A C T A G A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CMGCCGCCAGGCAGGC--
-CAAATCCAGACATCACA
 A G T C G T C A C T A G A G T C A G T C T C A G A G T C A G T C C G T A A C T G A T C G A G T C G T C A C T A G A C T G G T A C A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A