Information for 5-GTGGTAAGAA (Motif 6)

C A T G G C A T C T A G T C A G A G C T G T C A T G C A A T C G G C T A C G T A
Reverse Opposite:
C G A T C G A T A T G C A C G T C A G T C T G A A G T C G A T C C G T A G T A C
p-value:1e-12
log p-value:-2.930e+01
Information Content per bp:1.711
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.47%
Number of Background Sequences with motif456.7
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets56.8 +/- 28.9bp
Average Position of motif in Background49.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTGGTAAGAA-
CAGGTAAGTAT
 C A T G G C A T C T A G T C A G A G C T G T C A T G C A A T C G G C T A C G T A A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

GATA2/MA0036.2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTGGTAAGAA---
NCAGATAAGAANNN
 A C G T C A T G G C A T C T A G T C A G A G C T G T C A T G C A A T C G G C T A C G T A A C G T A C G T A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

PB0023.1_Gata6_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GTGGTAAGAA---
TATAGAGATAAGAATTG
 A C G T A C G T A C G T A C G T C A T G G C A T C T A G T C A G A G C T G T C A T G C A A T C G G C T A C G T A A C G T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

PB0021.1_Gata3_1/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GTGGTAAGAA------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C A T C T A G T C A G A G C T G T C A T G C A A T C G G C T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTAAGAA
NNGAGATAAGA-
 A C G T A C G T C A T G G C A T C T A G T C A G A G C T G T C A T G C A A T C G G C T A C G T A
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGGTAAGAA
NVAGATAAGR-
 A C G T C A T G G C A T C T A G T C A G A G C T G T C A T G C A A T C G G C T A C G T A
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGGTAAGAA
NAGATAAGNN
 C A T G G C A T C T A G T C A G A G C T G T C A T G C A A T C G G C T A C G T A
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGGTAAGAA
NBWGATAAGR-
 A C G T C A T G G C A T C T A G T C A G A G C T G T C A T G C A A T C G G C T A C G T A
T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGGTAAGAA
GGTCGTAAAAA
 A C G T C A T G G C A T C T A G T C A G A G C T G T C A T G C A A T C G G C T A C G T A
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTGGTAAGAA
ANAGATAAGAA
 A C G T C A T G G C A T C T A G T C A G A G C T G T C A T G C A A T C G G C T A C G T A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A