Information for 17-RRMAGCARAAGCCASM (Motif 23)

C T A G C T A G G T C A C G T A A C T G A G T C C G T A T C A G C G T A C G T A A T C G A G T C A G T C C G T A A T C G G T C A
Reverse Opposite:
A C G T A T G C A C G T A C T G A C T G A T G C A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A G T C A G T C
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.853
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.0 +/- 8.9bp
Average Position of motif in Background48.3 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RRMAGCARAAGCCASM
GAAASYGAAASY----
 C T A G C T A G G T C A C G T A A C T G A G T C C G T A T C A G C G T A C G T A A T C G A G T C A G T C C G T A A T C G G T C A
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:RRMAGCARAAGCCASM--
--------ATGCCAGACN
 C T A G C T A G G T C A C G T A A C T G A G T C C G T A T C A G C G T A C G T A A T C G A G T C A G T C C G T A A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:RRMAGCARAAGCCASM
-----CAAAGGTCAG-
 C T A G C T A G G T C A C G T A A C T G A G T C C G T A T C A G C G T A C G T A A T C G A G T C A G T C C G T A A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:RRMAGCARAAGCCASM
------AAAAGTCAA-
 C T A G C T A G G T C A C G T A A C T G A G T C C G T A T C A G C G T A C G T A A T C G A G T C A G T C C G T A A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

IRF2/MA0051.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RRMAGCARAAGCCASM-
GGAAAGCGAAACCAAAAC
 A C G T C T A G C T A G G T C A C G T A A C T G A G T C C G T A T C A G C G T A C G T A A T C G A G T C A G T C C G T A A T C G G T C A A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-RRMAGCARAAGCCASM
AGAGTCCAAAGTCCA--
 A C G T C T A G C T A G G T C A C G T A A C T G A G T C C G T A T C A G C G T A C G T A A T C G A G T C A G T C C G T A A T C G G T C A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.53
Offset:8
Orientation:forward strand
Alignment:RRMAGCARAAGCCASM--
--------AAACCACANN
 C T A G C T A G G T C A C G T A A C T G A G T C C G T A T C A G C G T A C G T A A T C G A G T C A G T C C G T A A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----RRMAGCARAAGCCASM
NNNGGGHAGCAHRTGCTRCC
 A C G T A C G T A C G T A C G T C T A G C T A G G T C A C G T A A C T G A G T C C G T A T C A G C G T A C G T A A T C G A G T C A G T C C G T A A T C G G T C A
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:RRMAGCARAAGCCASM---
--------AAACCACAGAN
 C T A G C T A G G T C A C G T A A C T G A G T C C G T A T C A G C G T A C G T A A T C G A G T C A G T C C G T A A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--RRMAGCARAAGCCASM
CANAGNNCAAAGTCCA--
 A C G T A C G T C T A G C T A G G T C A C G T A A C T G A G T C C G T A T C A G C G T A C G T A A T C G A G T C A G T C C G T A A T C G G T C A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T