Information for 16-CCTGCAAAMYMGA (Motif 21)

A G T C T A G C C G A T A C T G G T A C G T C A C G T A C G T A T G A C G A C T T G C A A T C G C T G A
Reverse Opposite:
A G C T T A G C A C G T C T G A A C T G A C G T A C G T A C G T A C T G T G A C C G T A A T C G T C A G
p-value:1e-9
log p-value:-2.080e+01
Information Content per bp:1.702
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif81.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets45.6 +/- 22.0bp
Average Position of motif in Background51.1 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTGCAAAMYMGA
GGTGCCAAGT---
 A G T C T A G C C G A T A C T G G T A C G T C A C G T A C G T A T G A C G A C T T G C A A T C G C T G A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCTGCAAAMYMGA
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A G T C T A G C C G A T A C T G G T A C G T C A C G T A C G T A T G A C G A C T T G C A A T C G C T G A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCTGCAAAMYMGA
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A G T C T A G C C G A T A C T G G T A C G T C A C G T A C G T A T G A C G A C T T G C A A T C G C T G A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCAAAMYMGA
ATATGCAAATNNN-
 A C G T A G T C T A G C C G A T A C T G G T A C G T C A C G T A C G T A T G A C G A C T T G C A A T C G C T G A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCTGCAAAMYMGA
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A G T C T A G C C G A T A C T G G T A C G T C A C G T A C G T A T G A C G A C T T G C A A T C G C T G A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCAAAMYMGA
TTATGCAAAT----
 A C G T A G T C T A G C C G A T A C T G G T A C G T C A C G T A C G T A T G A C G A C T T G C A A T C G C T G A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCTGCAAAMYMGA
ATATGCAAAT----
 A C G T A G T C T A G C C G A T A C T G G T A C G T C A C G T A C G T A T G A C G A C T T G C A A T C G C T G A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTGCAAAMYMGA
CAATTGCAAAAATAT
 A C G T A C G T A G T C T A G C C G A T A C T G G T A C G T C A C G T A C G T A T G A C G A C T T G C A A T C G C T G A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTGCAAAMYMGA
TATGCWAATBAV-
 A G T C T A G C C G A T A C T G G T A C G T C A C G T A C G T A T G A C G A C T T G C A A T C G C T G A
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTGCAAAMYMGA
WATGCAAATGAG-
 A G T C T A G C C G A T A C T G G T A C G T C A C G T A C G T A T G A C G A C T T G C A A T C G C T G A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T