Information for 14-CCWCCCAGSRRGRGGM (Motif 15)

A G T C A G T C G C A T A T G C A G T C A G T C C G T A A C T G T A G C T C A G C T G A A C T G C T A G C T A G A C T G T G A C
Reverse Opposite:
A C T G A G T C A G T C A G T C A G T C A G C T A G T C A T C G A G T C A C G T A C T G A C T G A T C G C G T A A C T G A C T G
p-value:1e-10
log p-value:-2.503e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.2 +/- 17.1bp
Average Position of motif in Background52.1 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCWCCCAGSRRGRGGM-
--DCHCAGCAGGRGGCC
 A G T C A G T C G C A T A T G C A G T C A G T C C G T A A C T G T A G C T C A G C T G A A C T G C T A G C T A G A C T G T G A C A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCWCCCAGSRRGRGGM
---CACAGCAGGGGG-
 A G T C A G T C G C A T A T G C A G T C A G T C C G T A A C T G T A G C T C A G C T G A A C T G C T A G C T A G A C T G T G A C
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCWCCCAGSRRGRGGM
CCACACAGCAGGAGA-
 A G T C A G T C G C A T A T G C A G T C A G T C C G T A A C T G T A G C T C A G C T G A A C T G C T A G C T A G A C T G T G A C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCWCCCAGSRRGRGGM-
---CACAGCGGGGGGTC
 A G T C A G T C G C A T A T G C A G T C A G T C C G T A A C T G T A G C T C A G C T G A A C T G C T A G C T A G A C T G T G A C A C G T
A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCWCCCAGSRRGRGGM
CCACACAGCAGGAGA-
 A G T C A G T C G C A T A T G C A G T C A G T C C G T A A C T G T A G C T C A G C T G A A C T G C T A G C T A G A C T G T G A C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCWCCCAGSRRGRGGM-
--NCGCAGCGGGGGGTC
 A G T C A G T C G C A T A T G C A G T C A G T C C G T A A C T G T A G C T C A G C T G A A C T G C T A G C T A G A C T G T G A C A C G T
A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCWCCCAGSRRGRGGM-
--NCNCAGCGGGGGGTC
 A G T C A G T C G C A T A T G C A G T C A G T C C G T A A C T G T A G C T C A G C T G A A C T G C T A G C T A G A C T G T G A C A C G T
A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCWCCCAGSRRGRGGM
NCCCCCCCGGGGGGN--
 A C G T A G T C A G T C G C A T A T G C A G T C A G T C C G T A A C T G T A G C T C A G C T G A A C T G C T A G C T A G A C T G T G A C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCWCCCAGSRRGRGGM
ACCCCCCCGGGGGGN--
 A C G T A G T C A G T C G C A T A T G C A G T C A G T C C G T A A C T G T A G C T C A G C T G A A C T G C T A G C T A G A C T G T G A C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCWCCCAGSRRGRGGM
CCCCCCCGGGGGNN--
 A G T C A G T C G C A T A T G C A G T C A G T C C G T A A C T G T A G C T C A G C T G A A C T G C T A G C T A G A C T G T G A C
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T