Information for 4-AKRSCACAGCYRCYCT (Motif 9)

C G T A C A T G C T G A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G T C T C G A A G T C A G C T A G T C A G C T
Reverse Opposite:
C T G A A C T G C T G A A C T G A G C T C T A G A C T G G T A C A C G T A C T G A C G T A C T G A T C G A G C T G T A C A C G T
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.1 +/- 26.8bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AKRSCACAGCYRCYCT
AAACCACAGC------
 C G T A C A T G C T G A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G T C T C G A A G T C A G C T A G T C A G C T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AKRSCACAGCYRCYCT
AAACCACAGAN-----
 C G T A C A T G C T G A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G T C T C G A A G T C A G C T A G T C A G C T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AKRSCACAGCYRCYCT
----CACAGN------
 C G T A C A T G C T G A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G T C T C G A A G T C A G C T A G T C A G C T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AKRSCACAGCYRCYCT
--GCCACRCCCACY--
 C G T A C A T G C T G A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G T C T C G A A G T C A G C T A G T C A G C T
A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AKRSCACAGCYRCYCT
NWAACCACADNN-----
 A C G T C G T A C A T G C T G A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G T C T C G A A G T C A G C T A G T C A G C T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AKRSCACAGCYRCYCT
----CGCAGCTGCG--
 C G T A C A T G C T G A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G T C T C G A A G T C A G C T A G T C A G C T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AKRSCACAGCYRCYCT
NAAACCACAG-------
 A C G T C G T A C A T G C T G A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G T C T C G A A G T C A G C T A G T C A G C T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AKRSCACAGCYRCYCT
AAACCACANN------
 C G T A C A T G C T G A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G T C T C G A A G T C A G C T A G T C A G C T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AKRSCACAGCYRCYCT
----AGCAGCTGCTNN
 C G T A C A T G C T G A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G T C T C G A A G T C A G C T A G T C A G C T
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AKRSCACAGCYRCYCT
-----NCAGCTGCTG-
 C G T A C A T G C T G A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A G T C T C G A A G T C A G C T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T