Information for 5-GKCCYCACASAGGRWG (Motif 14)

A C T G A C T G A G T C A G T C G A C T A G T C G T C A A G T C C G T A A T C G C G T A A C T G T A C G C T A G C G A T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C A G T C A C G T A T G C A C G T A C T G A C G T A C T G C T A G A C T G A C T G G T A C A G T C
p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.863
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 21.0bp
Average Position of motif in Background48.8 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GKCCYCACASAGGRWG-
-------AACAGGAAGT
 A C T G A C T G A G T C A G T C G A C T A G T C G T C A A G T C C G T A A T C G C G T A A C T G T A C G C T A G C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

PB0025.1_Glis2_1/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GKCCYCACASAGGRWG
TATCGACCCCCCACAG----
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C G A C T A G T C G T C A A G T C C G T A A T C G C G T A A C T G T A C G C T A G C G A T A C T G
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GKCCYCACASAGGRWG
-----AACAAAGG---
 A C T G A C T G A G T C A G T C G A C T A G T C G T C A A G T C C G T A A T C G C G T A A C T G T A C G C T A G C G A T A C T G
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GKCCYCACASAGGRWG
TGGGGCCCAC--------
 A C G T A C G T A C T G A C T G A G T C A G T C G A C T A G T C G T C A A G T C C G T A A T C G C G T A A C T G T A C G C T A G C G A T A C T G
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GKCCYCACASAGGRWG
--CCCCCCCGGGGGNN
 A C T G A C T G A G T C A G T C G A C T A G T C G T C A A G T C C G T A A T C G C G T A A C T G T A C G C T A G C G A T A C T G
A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GKCCYCACASAGGRWG
-GCCACACCCA-----
 A C T G A C T G A G T C A G T C G A C T A G T C G T C A A G T C C G T A A T C G C G T A A C T G T A C G C T A G C G A T A C T G
A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GKCCYCACASAGGRWG
GGCCACACCCAN----
 A C T G A C T G A G T C A G T C G A C T A G T C G T C A A G T C C G T A A T C G C G T A A C T G T A C G C T A G C G A T A C T G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GKCCYCACASAGGRWG
------ACAAAG----
 A C T G A C T G A G T C A G T C G A C T A G T C G T C A A G T C C G T A A T C G C G T A A C T G T A C G C T A G C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GKCCYCACASAGGRWG
GGCCACRCCCMK----
 A C T G A C T G A G T C A G T C G A C T A G T C G T C A A G T C C G T A A T C G C G T A A C T G T A C G C T A G C G A T A C T G
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GKCCYCACASAGGRWG--
--------ACAGGAAGTG
 A C T G A C T G A G T C A G T C G A C T A G T C G T C A A G T C C G T A A T C G C G T A A C T G T A C G C T A G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G