Information for 9-GAGGYCTCAGCGA (Motif 11)

T A C G G T C A A C T G C A T G A G C T A T G C A G C T A T G C G C T A A C T G G T A C T A C G T C G A
Reverse Opposite:
A G C T A T G C C A T G A G T C C G A T A T C G T C G A T A C G T C G A G A T C A G T C A C G T A T G C
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.677
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif430.7
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets51.4 +/- 22.1bp
Average Position of motif in Background48.4 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAGGYCTCAGCGA-
CAGGCCNNGGCCNN
 T A C G G T C A A C T G C A T G A G C T A T G C A G C T A T G C G C T A A C T G G T A C T A C G T C G A A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGGYCTCAGCGA
CNAGGCCT------
 A C G T T A C G G T C A A C T G C A T G A G C T A T G C A G C T A T G C G C T A A C T G G T A C T A C G T C G A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGGYCTCAGCGA
CTAGGCCT------
 A C G T T A C G G T C A A C T G C A T G A G C T A T G C A G C T A T G C G C T A A C T G G T A C T A C G T C G A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGGYCTCAGCGA-
--GTCCCCAGGGGA
 T A C G G T C A A C T G C A T G A G C T A T G C A G C T A T G C G C T A A C T G G T A C T A C G T C G A A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

ESR1/MA0112.3/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGGYCTCAGCGA----
CAGGTCACCGTGACCTT
 T A C G G T C A A C T G C A T G A G C T A T G C A G C T A T G C G C T A A C T G G T A C T A C G T C G A A C G T A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGGYCTCAGCGA
AAGGTCAC-----
 T A C G G T C A A C T G C A T G A G C T A T G C A G C T A T G C G C T A A C T G G T A C T A C G T C G A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGGYCTCAGCGA---
-AGGTCACCCTGACCT
 T A C G G T C A A C T G C A T G A G C T A T G C A G C T A T G C G C T A A C T G G T A C T A C G T C G A A C G T A C G T A C G T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GAGGYCTCAGCGA
-----CACAGN--
 T A C G G T C A A C T G C A T G A G C T A T G C A G C T A T G C G C T A A C T G G T A C T A C G T C G A
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGGYCTCAGCGA--
NAGGTCACNNTGACC
 T A C G G T C A A C T G C A T G A G C T A T G C A G C T A T G C G C T A A C T G G T A C T A C G T C G A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GAGGYCTCAGCGA--
---GCCTCAGGGCAT
 T A C G G T C A A C T G C A T G A G C T A T G C A G C T A T G C G C T A A C T G G T A C T A C G T C G A A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T