Information for 3-CAAGCCTTTT (Motif 4)

A T G C G T C A G C T A T A C G T A G C G T A C G A C T A C G T G A C T C A G T
Reverse Opposite:
G T C A C T G A T G C A C T G A C A T G A T C G A T G C C G A T C A G T T A C G
p-value:1e-14
log p-value:-3.408e+01
Information Content per bp:1.544
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.11%
Number of Background Sequences with motif190.6
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets50.5 +/- 27.4bp
Average Position of motif in Background47.9 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAAGCCTTTT
CAAGCTT---
 A T G C G T C A G C T A T A C G T A G C G T A C G A C T A C G T G A C T C A G T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAAGCCTTTT-
GCNGCCATCTTG
 A C G T A T G C G T C A G C T A T A C G T A G C G T A C G A C T A C G T G A C T C A G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGCCTTTT
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A G C T A T A C G T A G C G T A C G A C T A C G T G A C T C A G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CAAGCCTTTT------
----CCTTTTATAGNC
 A T G C G T C A G C T A T A C G T A G C G T A C G A C T A C G T G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

KLF13/MA0657.1/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CAAGCCTTTT----
ATGCCACGCCCCTTTTTG
 A C G T A C G T A C G T A C G T A T G C G T C A G C T A T A C G T A G C G T A C G A C T A C G T G A C T C A G T A C G T A C G T A C G T A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CAAGCCTTTT----
--TGACCTTTNCNT
 A T G C G T C A G C T A T A C G T A G C G T A C G A C T A C G T G A C T C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CAAGCCTTTT----
NNNNTGACCTTTNNNN
 A C G T A C G T A T G C G T C A G C T A T A C G T A G C G T A C G A C T A C G T G A C T C A G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAAGCCTTTT-------
--TGGACTTTGNNCTCN
 A T G C G T C A G C T A T A C G T A G C G T A C G A C T A C G T G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAAGCCTTTT-------
--TGACCTTTGCCCTAN
 A T G C G T C A G C T A T A C G T A G C G T A C G A C T A C G T G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAAGCCTTTT----
CCTTGCAATTTTTNN
 A C G T A T G C G T C A G C T A T A C G T A G C G T A C G A C T A C G T G A C T C A G T A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C