Information for 6-GCTTTTAGTCCCTGCT (Motif 28)

A C T G A G T C G A C T A G C T A G C T A G C T G C T A A T C G G A C T A G T C A G T C G A T C C G A T A C T G A T G C G C A T
Reverse Opposite:
C G T A T A C G T G A C G C T A C T A G T C A G T C A G C T G A T A G C C G A T T C G A T C G A T C G A C T G A T C A G T G A C
p-value:1e-9
log p-value:-2.084e+01
Information Content per bp:1.475
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 22.3bp
Average Position of motif in Background36.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GCTTTTAGTCCCTGCT---
-------CCCCCTGCTGTG
 A C T G A G T C G A C T A G C T A G C T A G C T G C T A A T C G G A C T A G T C A G T C G A T C C G A T A C T G A T G C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCTTTTAGTCCCTGCT-
NTTGTTAATCCCTCTNN
 A C T G A G T C G A C T A G C T A G C T A G C T G C T A A T C G G A C T A G T C A G T C G A T C C G A T A C T G A T G C G C A T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCTTTTAGTCCCTGCT
ASTTTCACTTCC----
 A C T G A G T C G A C T A G C T A G C T A G C T G C T A A T C G G A C T A G T C A G T C G A T C C G A T A C T G A T G C G C A T
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCTTTTAGTCCCTGCT
ASTTTCASTTYC----
 A C T G A G T C G A C T A G C T A G C T A G C T G C T A A T C G G A C T A G T C A G T C G A T C C G A T A C T G A T G C G C A T
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCTTTTAGTCCCTGCT
RSTTTCRSTTTC----
 A C T G A G T C G A C T A G C T A G C T A G C T G C T A A T C G G A C T A G T C A G T C G A T C C G A T A C T G A T G C G C A T
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GCTTTTAGTCCCTGCT
------ACTTCCTGNT
 A C T G A G T C G A C T A G C T A G C T A G C T G C T A A T C G G A C T A G T C A G T C G A T C C G A T A C T G A T G C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCTTTTAGTCCCTGCT----
-----GGCCYCCTGCTGDGH
 A C T G A G T C G A C T A G C T A G C T A G C T G C T A A T C G G A C T A G T C A G T C G A T C C G A T A C T G A T G C G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCTTTTAGTCCCTGCT
GATAATTAATCCCTCTT
 A C G T A C T G A G T C G A C T A G C T A G C T A G C T G C T A A T C G G A C T A G T C A G T C G A T C C G A T A C T G A T G C G C A T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

PH0124.1_Obox5_1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTTAGTCCCTGCT
NANANTTAATCCCNNNN
 A C G T A C T G A G T C G A C T A G C T A G C T A G C T G C T A A T C G G A C T A G T C A G T C G A T C C G A T A C T G A T G C G C A T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PB0012.1_Elf3_1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GCTTTTAGTCCCTGCT-
----TTACTTCCTNGTN
 A C T G A G T C G A C T A G C T A G C T A G C T G C T A A T C G G A C T A G T C A G T C G A T C C G A T A C T G A T G C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T