Information for 13-CACAAGGTTA (Motif 23)

G T A C C G T A A T G C C G T A C G T A A C T G C T A G A C G T A G C T T G C A
Reverse Opposite:
A C G T C T G A C G T A G A T C A G T C A C G T A C G T A T C G C G A T C A T G
p-value:1e-10
log p-value:-2.345e+01
Information Content per bp:1.839
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif73.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets40.9 +/- 24.8bp
Average Position of motif in Background52.3 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrg/MA0643.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CACAAGGTTA-
-TCAAGGTCAT
 G T A C C G T A A T G C C G T A C G T A A C T G C T A G A C G T A G C T T G C A A C G T
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CACAAGGTTA-----
TATTCAAGGTCATGCGA
 A C G T A C G T G T A C C G T A A T G C C G T A C G T A A C T G C T A G A C G T A G C T T G C A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CACAAGGTTA--
--CAAGGHCANV
 G T A C C G T A A T G C C G T A C G T A A C T G C T A G A C G T A G C T T G C A A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CACAAGGTTA
BTCAAGGTCA
 G T A C C G T A A T G C C G T A C G T A A C T G C T A G A C G T A G C T T G C A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CACAAGGTTA-
-TCAAGGTCAN
 G T A C C G T A A T G C C G T A C G T A A C T G C T A G A C G T A G C T T G C A A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CACAAGGTTA--
-TCAAGGTCATA
 G T A C C G T A A T G C C G T A C G T A A C T G C T A G A C G T A G C T T G C A A C G T A C G T
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CACAAGGTTA
NTCAAGGTCA
 G T A C C G T A A T G C C G T A C G T A A C T G C T A G A C G T A G C T T G C A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CACAAGGTTA
--CAAGCTT-
 G T A C C G T A A T G C C G T A C G T A A C T G C T A G A C G T A G C T T G C A
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CACAAGGTTA-
TTCAAGGTCAT
 G T A C C G T A A T G C C G T A C G T A A C T G C T A G A C G T A G C T T G C A A C G T
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CACAAGGTTA--
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T G T A C C G T A A T G C C G T A C G T A A C T G C T A G A C G T A G C T T G C A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C