Information for 8-WGACAAAGCCTTT (Motif 16)

C G T A A C T G C G T A A T G C C G T A T C G A C G T A C T A G A T G C A G T C A G C T A C G T A C G T
Reverse Opposite:
C G T A C G T A C T G A A C T G A T C G A G T C A C G T A C G T A C G T T A C G C G A T A G T C G C A T
p-value:1e-11
log p-value:-2.584e+01
Information Content per bp:1.821
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 12.2bp
Average Position of motif in Background38.2 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----WGACAAAGCCTTT
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A T G C C G T A T C G A C G T A C T A G A T G C A G T C A G C T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:WGACAAAGCCTTT
-AAGATATCCTT-
 C G T A A C T G C G T A A T G C C G T A T C G A C G T A C T A G A T G C A G T C A G C T A C G T A C G T
A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-WGACAAAGCCTTT
AAAACAAAGG----
 A C G T C G T A A C T G C G T A A T G C C G T A T C G A C G T A C T A G A T G C A G T C A G C T A C G T A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:WGACAAAGCCTTT
--ACAAAG-----
 C G T A A C T G C G T A A T G C C G T A T C G A C G T A C T A G A T G C A G T C A G C T A C G T A C G T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:WGACAAAGCCTTT-
--ACAAAGGNBCCT
 C G T A A C T G C G T A A T G C C G T A T C G A C G T A C T A G A T G C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-WGACAAAGCCTTT
VRRACAAWGG----
 A C G T C G T A A C T G C G T A A T G C C G T A T C G A C G T A C T A G A T G C A G T C A G C T A C G T A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-WGACAAAGCCTTT
GGAACAAAGR----
 A C G T C G T A A C T G C G T A A T G C C G T A T C G A C G T A C T A G A T G C A G T C A G C T A C G T A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:WGACAAAGCCTTT-----
--------CCTTTGATGT
 C G T A A C T G C G T A A T G C C G T A T C G A C G T A C T A G A T G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:WGACAAAGCCTTT---
--------CCTTTGTT
 C G T A A C T G C G T A A T G C C G T A T C G A C G T A C T A G A T G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:WGACAAAGCCTTT---
--------CCWTTGTY
 C G T A A C T G C G T A A T G C C G T A T C G A C G T A C T A G A T G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T