p-value: | 1e-8 |
log p-value: | -1.914e+01 |
Information Content per bp: | 1.924 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.46% |
Number of Background Sequences with motif | 0.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 54.2 +/- 35.9bp |
Average Position of motif in Background | 64.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0111.1_Nkx2-2/Jaspar
Match Rank: | 1 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACTCTCAAGAGCT--- NANTTTCAAGTGGTTAN |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACTCTCAAGAGCT ---CTYRAGTGSY |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ACTCTCAAGAGCT ---BTBRAGTGSN |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACTCTCAAGAGCT AGCCACTCAAG---- |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | ACTCTCAAGAGCT- ----TTGAGTGSTT |
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ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACTCTCAAGAGCT GGNTCTCGCGAGAAC- |
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NKX2-3/MA0672.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACTCTCAAGAGCT ---NTCAAGTGGN |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACTCTCAAGAGCT ---NTCAAGTGG- |
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MEF2B/MA0660.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACTCTCAAGAGCT GCTATAAATAGC- |
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GFX(?)/Promoter/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ACTCTCAAGAGCT ATTCTCGCGAGA--- |
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