Information for 9-CCGCCCATKGGCT (Motif 6)

A G T C G A T C A C T G G A T C G A T C T A G C T C G A A C G T A C G T A T C G A T C G A G T C A C G T
Reverse Opposite:
T G C A A C T G A T G C A T G C G T C A T G C A A C G T A T C G C T A G C T A G T A G C C T A G T A C G
p-value:1e-12
log p-value:-2.917e+01
Information Content per bp:1.690
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif73.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets52.5 +/- 25.9bp
Average Position of motif in Background53.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:CCGCCCATKGGCT
---CCGATTGGCT
 A G T C G A T C A C T G G A T C G A T C T A G C T C G A A C G T A C G T A T C G A T C G A G T C A C G T
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CCGCCCATKGGCT---
----TGATTGGCTANN
 A G T C G A T C A C T G G A T C G A T C T A G C T C G A A C G T A C G T A T C G A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CCGCCCATKGGCT-----
---CTGATTGGTCNATTT
 A G T C G A T C A C T G G A T C G A T C T A G C T C G A A C G T A C G T A T C G A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCGCCCATKGGCT-
CCGCCCAAGGGCAG
 A G T C G A T C A C T G G A T C G A T C T A G C T C G A A C G T A C G T A T C G A T C G A G T C A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCGCCCATKGGCT
GTGCGCATGCGC-
 A G T C G A T C A C T G G A T C G A T C T A G C T C G A A C G T A C G T A T C G A T C G A G T C A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.62
Offset:7
Orientation:forward strand
Alignment:CCGCCCATKGGCT
-------TTGGCA
 A G T C G A T C A C T G G A T C G A T C T A G C T C G A A C G T A C G T A T C G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGCCCATKGGCT--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A G T C G A T C A C T G G A T C G A T C T A G C T C G A A C G T A C G T A T C G A T C G A G T C A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CCGCCCATKGGCT--
------NTTGGCANN
 A G T C G A T C A C T G G A T C G A T C T A G C T C G A A C G T A C G T A T C G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCGCCCATKGGCT
CTGCGCATGCGC-
 A G T C G A T C A C T G G A T C G A T C T A G C T C G A A C G T A C G T A T C G A T C G A G T C A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T

PH0109.1_Nkx1-1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCGCCCATKGGCT--
NCCCACTAATTAGCGCA
 A C G T A C G T A G T C G A T C A C T G G A T C G A T C T A G C T C G A A C G T A C G T A T C G A T C G A G T C A C G T A C G T A C G T
A G C T G T A C A T G C G A T C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G T C A C T G A T G C G C T A