Motif 18

Information for 12-CCCCSCCCCC (Motif 18)

Reverse Opposite:

p-value:	1e-5
log p-value:	-1.367e+01
Information Content per bp:	1.761
Number of Target Sequences with motif	33.0
Percentage of Target Sequences with motif	3.63%
Number of Background Sequences with motif	659.4
Percentage of Background Sequences with motif	1.40%
Average Position of motif in Targets	52.3 +/- 28.2bp
Average Position of motif in Background	50.9 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)	-0.7
Multiplicity (# of sites on avg that occur together)	1.09
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:	1
Score:	0.90
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCSCCCCC GCCCCGCCCCC

PB0097.1_Zfp281_1/Jaspar

Match Rank:	2
Score:	0.87
Offset:	-2
Orientation:	forward strand
Alignment:	--CCCCSCCCCC--- TCCCCCCCCCCCCCC

PB0100.1_Zfp740_1/Jaspar

Match Rank:	3
Score:	0.86
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCSCCCCC----- CCCCCCCCCCCACTTG

Sp1(Zf)/Promoter/Homer

Match Rank:	4
Score:	0.85
Offset:	-2
Orientation:	forward strand
Alignment:	--CCCCSCCCCC GGCCCCGCCCCC

SP2/MA0516.1/Jaspar

Match Rank:	5
Score:	0.85
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCSCCCCC---- GCCCCGCCCCCTCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:	6
Score:	0.85
Offset:	0
Orientation:	reverse strand
Alignment:	CCCCSCCCCC CCCCCCCC--

POL003.1_GC-box/Jaspar

Match Rank:	7
Score:	0.83
Offset:	-3
Orientation:	reverse strand
Alignment:	---CCCCSCCCCC- NAGCCCCGCCCCCN

EGR1/MA0162.2/Jaspar

Match Rank:	8
Score:	0.83
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCSCCCCC--- CCCCCGCCCCCGCC

ZNF740/MA0753.1/Jaspar

Match Rank:	9
Score:	0.82
Offset:	0
Orientation:	forward strand
Alignment:	CCCCSCCCCC CCCCCCCCAC

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:	10
Score:	0.82
Offset:	-1
Orientation:	reverse strand
Alignment:	-CCCCSCCCCC- GCTCCGCCCMCY