Information for 16-CTGACCTGACTDG (Motif 17)

A G T C A G C T A C T G G T C A A T G C A G T C A C G T A C T G C T G A A G T C A C G T C G T A A T C G
Reverse Opposite:
A T G C G A C T C G T A A C T G A G C T G T A C C G T A C T A G A T C G A C G T A G T C C T G A A C T G
p-value:1e-6
log p-value:-1.609e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.4 +/- 25.8bp
Average Position of motif in Background30.6 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGACCTGACTDG
CCTCACCTG-----
 A C G T A G T C A G C T A C T G G T C A A T G C A G T C A C G T A C T G C T G A A G T C A C G T C G T A A T C G
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGACCTGACTDG
-TGACCTYA----
 A G T C A G C T A C T G G T C A A T G C A G T C A C G T A C T G C T G A A G T C A C G T C G T A A T C G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGACCTGACTDG
-TGACCTARTT--
 A G T C A G C T A C T G G T C A A T G C A G T C A C G T A C T G C T G A A G T C A C G T C G T A A T C G
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGACCTGACTDG
-TGACCT------
 A G T C A G C T A C T G G T C A A T G C A G T C A C G T A C T G C T G A A G T C A C G T C G T A A T C G
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGACCTGACTDG
-TGACCTTGAT--
 A G T C A G C T A C T G G T C A A T G C A G T C A C G T A C T G C T G A A G T C A C G T C G T A A T C G
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCTGACTDG
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A G T C A G C T A C T G G T C A A T G C A G T C A C G T A C T G C T G A A G T C A C G T C G T A A T C G
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGACCTGACTDG
-NNACTTGCCTT-
 A G T C A G C T A C T G G T C A A T G C A G T C A C G T A C T G C T G A A G T C A C G T C G T A A T C G
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGACCTGACTDG-----
-NNTNNTGTCTGGNNTNG
 A G T C A G C T A C T G G T C A A T G C A G T C A C G T A C T G C T G A A G T C A C G T C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTGACCTGACTDG
-----CTGTCTGG
 A G T C A G C T A C T G G T C A A T G C A G T C A C G T A C T G C T G A A G T C A C G T C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTGACCTGACTDG
GTCATGCHTGRCTGS
 A C G T A C G T A G T C A G C T A C T G G T C A A T G C A G T C A C G T A C T G C T G A A G T C A C G T C G T A A T C G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C