Information for 5-RDKGTTCAGC (Motif 3)

C T G A C G A T C A T G A C T G C A G T G C A T A T G C C T G A C A T G G T A C
Reverse Opposite:
C A T G G T A C G A C T T A C G C G T A G C T A T G A C G T A C G C T A G A C T
p-value:1e-34
log p-value:-7.967e+01
Information Content per bp:1.574
Number of Target Sequences with motif170.0
Percentage of Target Sequences with motif19.43%
Number of Background Sequences with motif3239.6
Percentage of Background Sequences with motif6.75%
Average Position of motif in Targets48.4 +/- 22.1bp
Average Position of motif in Background50.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:RDKGTTCAGC-----
----GTCAGCANNTN
 C T G A C G A T C A T G A C T G C A G T G C A T A T G C C T G A C A T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:RDKGTTCAGC-
-TGAGTCAGCA
 C T G A C G A T C A T G A C T G C A G T G C A T A T G C C T G A C A T G G T A C A C G T
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:RDKGTTCAGC-----
---NGTCAGCANTTT
 C T G A C G A T C A T G A C T G C A G T G C A T A T G C C T G A C A T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:RDKGTTCAGC------
-HWWGTCAGCAWWTTT
 C T G A C G A T C A T G A C T G C A G T G C A T A T G C C T G A C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

POL002.1_INR/Jaspar

Match Rank:5
Score:0.65
Offset:5
Orientation:forward strand
Alignment:RDKGTTCAGC---
-----TCAGTCTT
 C T G A C G A T C A T G A C T G C A G T G C A T A T G C C T G A C A T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:RDKGTTCAGC-----
CTGAGTCAGCAATTT
 C T G A C G A T C A T G A C T G C A G T G C A T A T G C C T G A C A T G G T A C A C G T A C G T A C G T A C G T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.64
Offset:6
Orientation:forward strand
Alignment:RDKGTTCAGC-
------CAGCC
 C T G A C G A T C A T G A C T G C A G T G C A T A T G C C T G A C A T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RDKGTTCAGC-------
GCTGAGTCAGCAATTTTT
 A C G T C T G A C G A T C A T G A C T G C A G T G C A T A T G C C T G A C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RDKGTTCAGC
TGGTTTCAGT
 C T G A C G A T C A T G A C T G C A G T G C A T A T G C C T G A C A T G G T A C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:RDKGTTCAGC-
----TTCCTCT
 C T G A C G A T C A T G A C T G C A G T G C A T A T G C C T G A C A T G G T A C A C G T
A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T