Information for 9-CGCCCTCCTTTTT (Motif 10)

A G T C C T A G A G T C A G T C A G T C A C G T A G T C A G T C C G A T A C G T A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G C T A G A C T G A G T C A C T G
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 23.0bp
Average Position of motif in Background61.9 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGCCCTCCTTTTT--
-NNGCACCTTTCTCC
 A G T C C T A G A G T C A G T C A G T C A C G T A G T C A G T C C G A T A C G T A C G T A C G T A G C T A C G T A C G T
A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCTCCTTTTT
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A G T C C T A G A G T C A G T C A G T C A C G T A G T C A G T C C G A T A C G T A C G T A C G T A G C T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCTCCTTTTT
GCCMCGCCCMCY-----
 A C G T A C G T A C G T A C G T A G T C C T A G A G T C A G T C A G T C A C G T A G T C A G T C C G A T A C G T A C G T A C G T A G C T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCTCCTTTTT
ANCGCGCGCCCTTNN
 A C G T A C G T A G T C C T A G A G T C A G T C A G T C A C G T A G T C A G T C C G A T A C G T A C G T A C G T A G C T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

KLF13/MA0657.1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGCCCTCCTTTTT-
ATGCCACGCCCCTTTTTG
 A C G T A C G T A C G T A C G T A G T C C T A G A G T C A G T C A G T C A C G T A G T C A G T C C G A T A C G T A C G T A C G T A G C T A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CGCCCTCCTTTTT-
------CCTTTGTT
 A G T C C T A G A G T C A G T C A G T C A C G T A G T C A G T C C G A T A C G T A C G T A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CGCCCTCCTTTTT-
------CCWTTGTY
 A G T C C T A G A G T C A G T C A G T C A C G T A G T C A G T C C G A T A C G T A C G T A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCTCCTTTTT
NTCGCGCGCCTTNNN
 A C G T A C G T A G T C C T A G A G T C A G T C A G T C A C G T A G T C A G T C C G A T A C G T A C G T A C G T A G C T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

SPIC/MA0687.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGCCCTCCTTTTT--
-TACTTCCTCTTTTN
 A G T C C T A G A G T C A G T C A G T C A C G T A G T C A G T C C G A T A C G T A C G T A C G T A G C T A C G T A C G T
A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGCCCTCCTTTTT-
--GCNGCCATCTTG
 A G T C C T A G A G T C A G T C A G T C A C G T A G T C A G T C C G A T A C G T A C G T A C G T A G C T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G