Information for 3-AAACCACAGGAAG (Motif 3)

G C T A C G T A C G T A G T A C A T G C C G T A T A G C C G T A C A T G C A T G T C G A T C G A C T A G
Reverse Opposite:
G A T C A C G T A C G T G A T C G T A C C G A T A C T G A C G T A T C G A C T G A C G T G C A T C A G T
p-value:1e-17
log p-value:-3.920e+01
Information Content per bp:1.762
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif33.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets28.9 +/- 20.2bp
Average Position of motif in Background49.6 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAGGAAG
NAAACCACAG----
 A C G T G C T A C G T A C G T A G T A C A T G C C G T A T A G C C G T A C A T G C A T G T C G A T C G A C T A G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:AAACCACAGGAAG
AAACCACAGAN--
 G C T A C G T A C G T A G T A C A T G C C G T A T A G C C G T A C A T G C A T G T C G A T C G A C T A G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:AAACCACAGGAAG
AAACCACAGC---
 G C T A C G T A C G T A G T A C A T G C C G T A T A G C C G T A C A T G C A T G T C G A T C G A C T A G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AAACCACAGGAAG
AAACCACANN---
 G C T A C G T A C G T A G T A C A T G C C G T A T A G C C G T A C A T G C A T G T C G A T C G A C T A G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAGGAAG
NWAACCACADNN--
 A C G T G C T A C G T A C G T A G T A C A T G C C G T A T A G C C G T A C A T G C A T G T C G A T C G A C T A G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.72
Offset:4
Orientation:forward strand
Alignment:AAACCACAGGAAG-
----AACAGGAAGT
 G C T A C G T A C G T A G T A C A T G C C G T A T A G C C G T A C A T G C A T G T C G A T C G A C T A G A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAACCACAGGAAG
AAACCGCAA----
 G C T A C G T A C G T A G T A C A T G C C G T A T A G C C G T A C A T G C A T G T C G A T C G A C T A G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAACCACAGGAAG
AAACCGCAAA---
 G C T A C G T A C G T A G T A C A T G C C G T A T A G C C G T A C A T G C A T G T C G A T C G A C T A G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.68
Offset:5
Orientation:forward strand
Alignment:AAACCACAGGAAG--
-----ACAGGAAGTG
 G C T A C G T A C G T A G T A C A T G C C G T A T A G C C G T A C A T G C A T G T C G A T C G A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AAACCACAGGAAG-
----NACAGGAAAT
 G C T A C G T A C G T A G T A C A T G C C G T A T A G C C G T A C A T G C A T G T C G A T C G A C T A G A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T