Information for 13-GCGTGAGTGT (Motif 23)

C A T G G T A C A C T G G A C T T C A G G T C A C T A G A C G T C A T G A C G T
Reverse Opposite:
T G C A G T A C T G C A G A T C C A G T A G T C C T G A T G A C C A T G G T A C
p-value:1e-3
log p-value:-8.002e+00
Information Content per bp:1.658
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.62%
Number of Background Sequences with motif888.0
Percentage of Background Sequences with motif1.87%
Average Position of motif in Targets57.4 +/- 23.2bp
Average Position of motif in Background50.0 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAGTGT
TGCGTGGGYG-
 A C G T C A T G G T A C A C T G G A C T T C A G G T C A C T A G A C G T C A T G A C G T
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T

EGR2/MA0472.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCGTGAGTGT
TGCGTGGGCGT
 A C G T C A T G G T A C A C T G G A C T T C A G G T C A C T A G A C G T C A T G A C G T
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAGTGT-
NGCGTGGGCGGR
 A C G T C A T G G T A C A C T G G A C T T C A G G T C A C T A G A C G T C A T G A C G T A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCGTGAGTGT--
-CTTGAGTGGCT
 C A T G G T A C A C T G G A C T T C A G G T C A C T A G A C G T C A T G A C G T A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

EGR4/MA0733.1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GCGTGAGTGT--
AANTGCGTGGGCGTNN
 A C G T A C G T A C G T A C G T C A T G G T A C A C T G G A C T T C A G G T C A C T A G A C G T C A T G A C G T A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

EGR3/MA0732.1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGAGTGT--
ANTGCGTGGGCGTNN
 A C G T A C G T A C G T C A T G G T A C A C T G G A C T T C A G G T C A C T A G A C G T C A T G A C G T A C G T A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAGTGT
TGCGTG-----
 A C G T C A T G G T A C A C T G G A C T T C A G G T C A C T A G A C G T C A T G A C G T
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGAGTGT----
NNGCGTGTGTGCNGCN
 A C G T A C G T C A T G G T A C A C T G G A C T T C A G G T C A C T A G A C G T C A T G A C G T A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCGTGAGTGT--
--TTRAGTGSYK
 C A T G G T A C A C T G G A C T T C A G G T C A C T A G A C G T C A T G A C G T A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCGTGAGTGT--
--TTGAGTGSTT
 C A T G G T A C A C T G G A C T T C A G G T C A C T A G A C G T C A T G A C G T A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T