Information for 3-CCNCMGCAGGAAGGAA (Motif 10)

A G T C G T A C A C G T A G T C G T C A A C T G T A G C C G T A A C T G C T A G T G C A C G T A A C T G A T C G T C G A C G T A
Reverse Opposite:
A C G T A G C T A T G C A G T C G C A T A C G T A G T C A G T C G C A T A C T G T A G C C A G T A C T G T C G A A C T G A C T G
p-value:1e-9
log p-value:-2.271e+01
Information Content per bp:1.738
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.0 +/- 19.1bp
Average Position of motif in Background53.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCNCMGCAGGAAGGAA
-CACAGCAGGGGG---
 A G T C G T A C A C G T A G T C G T C A A C T G T A G C C G T A A C T G C T A G T G C A C G T A A C T G A T C G T C G A C G T A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCNCMGCAGGAAGGAA
DCHCAGCAGGRGGCC-
 A G T C G T A C A C G T A G T C G T C A A C T G T A G C C G T A A C T G C T A G T G C A C G T A A C T G A T C G T C G A C G T A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:3
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CCNCMGCAGGAAGGAA----
--------NDCAGGAARTNN
 A G T C G T A C A C G T A G T C G T C A A C T G T A G C C G T A A C T G C T A G T G C A C G T A A C T G A T C G T C G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CCNCMGCAGGAAGGAA
------CWGGCGGGAA
 A G T C G T A C A C G T A G T C G T C A A C T G T A G C C G T A A C T G C T A G T G C A C G T A A C T G A T C G T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.56
Offset:9
Orientation:forward strand
Alignment:CCNCMGCAGGAAGGAA---
---------ACAGGAAGTG
 A G T C G T A C A C G T A G T C G T C A A C T G T A G C C G T A A C T G C T A G T G C A C G T A A C T G A T C G T C G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CCNCMGCAGGAAGGAA--
--------NACAGGAAAT
 A G T C G T A C A C G T A G T C G T C A A C T G T A G C C G T A A C T G C T A G T G C A C G T A A C T G A T C G T C G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCNCMGCAGGAAGGAA
CCACACAGCAGGAGA---
 A C G T A C G T A G T C G T A C A C G T A G T C G T C A A C T G T A G C C G T A A C T G C T A G T G C A C G T A A C T G A T C G T C G A C G T A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.54
Offset:9
Orientation:forward strand
Alignment:CCNCMGCAGGAAGGAA
---------AGAGGAA
 A G T C G T A C A C G T A G T C G T C A A C T G T A G C C G T A A C T G C T A G T G C A C G T A A C T G A T C G T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCNCMGCAGGAAGGAA------
----GGAAGGAAGGAAGGAAGG
 A G T C G T A C A C G T A G T C G T C A A C T G T A G C C G T A A C T G C T A G T G C A C G T A A C T G A T C G T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CCNCMGCAGGAAGGAA--
--------AVCAGGAAGT
 A G T C G T A C A C G T A G T C G T C A A C T G T A G C C G T A A C T G C T A G T G C A C G T A A C T G A T C G T C G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T