p-value: | 1e-14 |
log p-value: | -3.302e+01 |
Information Content per bp: | 1.769 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 1.00% |
Number of Background Sequences with motif | 2.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 42.2 +/- 19.2bp |
Average Position of motif in Background | 48.4 +/- 14.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.14 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hoxc9/MA0485.1/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGACATAAATCTBCCT GGCCATAAATCAC--- |
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GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGACATAAATCTBCCT NAGATWNBNATCTNN-- |
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HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGACATAAATCTBCCT GGCCATAAATCA---- |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGACATAAATCTBCCT GGCCATAAATCA---- |
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Hoxa9/MA0594.1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGACATAAATCTBCCT -GCCATAAATCA---- |
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SD0003.1_at_AC_acceptor/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGACATAAATCTBCCT -----AAGATATCCTT |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGACATAAATCTBCCT RGCCATYAATCA---- |
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OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGACATAAATCTBCCT--- ----ATGAATATTCATGAG |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGACATAAATCTBCCT ----ATGMATATDC-- |
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OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGACATAAATCTBCCT- --AYATGYATATGCATR |
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