Information for 20-AATTGCCTAC (Motif 37)

C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
p-value:1e-5
log p-value:-1.229e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 33.2bp
Average Position of motif in Background78.4 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AATTGCCTAC
NNACTTGCCTT-
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T C G T A A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:2
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------AATTGCCTAC
GCGCTATAATTACCGAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T C G T A A G T C
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

PH0024.1_Dlx5/Jaspar

Match Rank:3
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCCTAC
NANNGNTAATTACCNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T C G T A A G T C
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AATTGCCTAC--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AATTGCCTAC--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0007.1_Barx1/Jaspar

Match Rank:6
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCCTAC
ATNNACTAATTACTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T C G T A A G T C
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATTGCCTAC
NTAATTGN----
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T C G T A A G T C
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:8
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCCTAC
NTNAGNTAATTACCTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T C G T A A G T C
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AATTGCCTAC--
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

MSX1/MA0666.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AATTGCCTAC
NTAATTGG----
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T C G T A A G T C
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T