Information for 22-ACATCAACACTCACAA (Motif 27)

C G T A A G T C C G T A C A G T A G T C C G T A C G T A A G T C C G T A G A T C C G A T A G T C C G T A A G T C C G T A G T C A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C T G C G T A C T A G A C G T A C T G A C G T A C G T A C T G G T C A A C G T A C T G A C G T
p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.5 +/- 21.0bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACATCAACACTCACAA
CAAACAACAACACCT----
 A C G T A C G T A C G T C G T A A G T C C G T A C A G T A G T C C G T A C G T A A G T C C G T A G A T C C G A T A G T C C G T A A G T C C G T A G T C A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACATCAACACTCACAA
TCACCCATCAATAAACA---
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C A G T A G T C C G T A C G T A A G T C C G T A G A T C C G A T A G T C C G T A A G T C C G T A G T C A
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ACATCAACACTCACAA
ATGTCACAACAACAC------
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C A G T A G T C C G T A C G T A A G T C C G T A G A T C C G A T A G T C C G T A A G T C C G T A G T C A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACATCAACACTCACAA
AAACAAACATTC----
 C G T A A G T C C G T A C A G T A G T C C G T A C G T A A G T C C G T A G A T C C G A T A G T C C G T A A G T C C G T A G T C A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACATCAACACTCACAA
AAATAAACA-------
 C G T A A G T C C G T A C A G T A G T C C G T A C G T A A G T C C G T A G A T C C G A T A G T C C G T A A G T C C G T A G T C A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:ACATCAACACTCACAA
--GTAAACAA------
 C G T A A G T C C G T A C A G T A G T C C G T A C G T A A G T C C G T A G A T C C G A T A G T C C G T A A G T C C G T A G T C A
A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:ACATCAACACTCACAA
----MRSCACTYAA--
 C G T A A G T C C G T A C A G T A G T C C G T A C G T A A G T C C G T A G A T C C G A T A G T C C G T A A G T C C G T A G T C A
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ACATCAACACTCACAA
---CCATCAATCAAA-
 C G T A A G T C C G T A C A G T A G T C C G T A C G T A A G T C C G T A G A T C C G A T A G T C C G T A A G T C C G T A G T C A
A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ACATCAACACTCACAA
----AAGCACTTAA--
 C G T A A G T C C G T A C A G T A G T C C G T A C G T A A G T C C G T A G A T C C G A T A G T C C G T A A G T C C G T A G T C A
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ACATCAACACTCACAA
TAAGTAAACAAA-----
 A C G T C G T A A G T C C G T A C A G T A G T C C G T A C G T A A G T C C G T A G A T C C G A T A G T C C G T A A G T C C G T A G T C A
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T