Information for 14-CWAASCTKATYAS (Motif 18)

G T A C C G A T C G T A C G T A T A C G A G T C A G C T A C T G C G T A A C G T A G C T C G T A A T C G
Reverse Opposite:
A T G C A C G T C T G A C G T A A C G T G T A C C T G A A C T G A T G C A C G T A C G T C G T A C A T G
p-value:1e-10
log p-value:-2.344e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.7 +/- 17.9bp
Average Position of motif in Background65.4 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0094.1_Lhx4/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CWAASCTKATYAS----
CAAAGCTAATTAGNTTN
 G T A C C G A T C G T A C G T A T A C G A G T C A G C T A C T G C G T A A C G T A G C T C G T A A T C G A C G T A C G T A C G T A C G T
G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CWAASCTKATYAS
-TAATCHGATTAC
 G T A C C G A T C G T A C G T A T A C G A G T C A G C T A C T G C G T A A C G T A G C T C G T A A T C G
A C G T G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CWAASCTKATYAS
---AGCTCATTAT
 G T A C C G A T C G T A C G T A T A C G A G T C A G C T A C T G C G T A A C G T A G C T C G T A A T C G
A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PHOX2A/MA0713.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CWAASCTKATYAS
-TAATTTAATTA-
 G T A C C G A T C G T A C G T A T A C G A G T C A G C T A C T G C G T A A C G T A G C T C G T A A T C G
A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T

DUXA/MA0884.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CWAASCTKATYAS
CTAATTTAATCAA
 G T A C C G A T C G T A C G T A T A C G A G T C A G C T A C T G C G T A A C G T A G C T C G T A A T C G
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

PH0058.1_Hoxb3/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CWAASCTKATYAS-----
-TGAGCTAATTAGTTGGA
 G T A C C G A T C G T A C G T A T A C G A G T C A G C T A C T G C G T A A C G T A G C T C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

PH0045.1_Hoxa1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CWAASCTKATYAS---
CTGAGCTAATTACCGT
 G T A C C G A T C G T A C G T A T A C G A G T C A G C T A C T G C G T A A C G T A G C T C G T A A T C G A C G T A C G T A C G T
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

Phox2b/MA0681.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CWAASCTKATYAS
-TAATTTAATTA-
 G T A C C G A T C G T A C G T A T A C G A G T C A G C T A C T G C G T A A C G T A G C T C G T A A T C G
A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CWAASCTKATYAS
YTAATYNRATTA-
 G T A C C G A T C G T A C G T A T A C G A G T C A G C T A C T G C G T A A C G T A G C T C G T A A T C G
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CWAASCTKATYAS-
NWTAAYCYAATCAWN
 A C G T G T A C C G A T C G T A C G T A T A C G A G T C A G C T A C T G C G T A A C G T A G C T C G T A A T C G A C G T
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T