Information for 2-AAGAAAACATAATTGC (Motif 4)

C G T A C G T A A C T G C G T A C G T A C G T A C T G A G T A C C G T A C G A T C T G A C T G A C G A T A C G T A T C G G T A C
Reverse Opposite:
A C T G A T G C G T C A C G T A A G C T A G C T C G T A A C G T A C T G A G C T G C A T A C G T A C G T A G T C A C G T A C G T
p-value:1e-15
log p-value:-3.640e+01
Information Content per bp:1.867
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.6 +/- 29.8bp
Average Position of motif in Background88.9 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAGAAAACATAATTGC
CAAAAGTAAACAAAG----
 A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A C G T A C T G A G T A C C G T A C G A T C T G A C T G A C G A T A C G T A T C G G T A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGAAAACATAATTGC
AAGATAAGATAACA--
 C G T A C G T A A C T G C G T A C G T A C G T A C T G A G T A C C G T A C G A T C T G A C T G A C G A T A C G T A T C G G T A C
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGAAAACATAATTGC
TAAGTAAACAAA-----
 A C G T C G T A C G T A A C T G C G T A C G T A C G T A C T G A G T A C C G T A C G A T C T G A C T G A C G A T A C G T A T C G G T A C
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGAAAACATAATTGC
AAAGTAAACA-------
 A C G T C G T A C G T A A C T G C G T A C G T A C G T A C T G A G T A C C G T A C G A T C T G A C T G A C G A T A C G T A T C G G T A C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAGAAAACATAATTGC----
-----GAAAAAATTGCAAGG
 C G T A C G T A A C T G C G T A C G T A C G T A C T G A G T A C C G T A C G A T C T G A C T G A C G A T A C G T A T C G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGAAAACATAATTGC
AAAGTAAACA-------
 A C G T C G T A C G T A A C T G C G T A C G T A C G T A C T G A G T A C C G T A C G A T C T G A C T G A C G A T A C G T A T C G G T A C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAGAAAACATAATTGC
AAAAAGTAAACAAAGAC--
 A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A C G T A C T G A G T A C C G T A C G A T C T G A C T G A C G A T A C G T A T C G G T A C
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGAAAACATAATTGC
AAAGTAAACAAAAATT-
 A C G T C G T A C G T A A C T G C G T A C G T A C G T A C T G A G T A C C G T A C G A T C T G A C T G A C G A T A C G T A T C G G T A C
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAGAAAACATAATTGC
AAGTAAACAAA-----
 C G T A C G T A A C T G C G T A C G T A C G T A C T G A G T A C C G T A C G A T C T G A C T G A C G A T A C G T A T C G G T A C
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AAGAAAACATAATTGC
GTTAAAAAAAAAAATTA----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A C G T A C T G A G T A C C G T A C G A T C T G A C T G A C G A T A C G T A T C G G T A C
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T A C G T A C G T