Information for 20-TCCGCCTGCT (Motif 34)

A C G T T A G C A G T C C T A G A G T C A G T C A C G T A C T G A G T C C G A T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C T G A C T G A G T C C T A G A C T G C G T A
p-value:1e-7
log p-value:-1.646e+01
Information Content per bp:1.879
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets47.3 +/- 23.7bp
Average Position of motif in Background51.0 +/- 39.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TCCGCCTGCT-
SNGCACCTGCHS
 A C G T A C G T T A G C A G T C C T A G A G T C A G T C A C G T A C T G A G T C C G A T A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TCCGCCTGCT---
-CCCCCTGCTGTG
 A C G T T A G C A G T C C T A G A G T C A G T C A C G T A C T G A G T C C G A T A C G T A C G T A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TCCGCCTGCT
NNCACCTGNN
 A C G T T A G C A G T C C T A G A G T C A G T C A C G T A C T G A G T C C G A T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCCGCCTGCT
-NCACCTGTN
 A C G T T A G C A G T C C T A G A G T C A G T C A C G T A C T G A G T C C G A T
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCCGCCTGCT------
-TNTCCTGCTGTGNNG
 A C G T T A G C A G T C C T A G A G T C A G T C A C G T A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCCGCCTGCT
AACACCTGCT
 A C G T T A G C A G T C C T A G A G T C A G T C A C G T A C T G A G T C C G A T
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCCGCCTGCT----
GGCCYCCTGCTGDGH
 A C G T A C G T T A G C A G T C C T A G A G T C A G T C A C G T A C T G A G T C C G A T A C G T A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCCGCCTGCT------
-TCNCCTGCTGNGNNN
 A C G T T A G C A G T C C T A G A G T C A G T C A C G T A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCCGCCTGCT
RYHYACCTGB-
 A C G T A C G T T A G C A G T C C T A G A G T C A G T C A C G T A C T G A G T C C G A T
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCCGCCTGCT
CGCACCTGCT
 A C G T T A G C A G T C C T A G A G T C A G T C A C G T A C T G A G T C C G A T
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T