Information for 17-GGAAATAGAA (Motif 32)

A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T C G T A A C G T A C G T C G A T A G T C A G T C
p-value:1e-7
log p-value:-1.791e+01
Information Content per bp:1.963
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.6 +/- 6.2bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGAAATAGAA-----
GGAAANTGAAACTNA
 A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PH0013.1_Cdx2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGAAATAGAA---
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

PB0115.1_Ehf_2/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GGAAATAGAA
AAGATCGGAANTNNNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G T A
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGAAATAGAA---
-GAAACTGAAACT
 A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

PH0012.1_Cdx1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGAAATAGAA---
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0046.1_Hoxa10/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGAAATAGAA----
TAGGTAATAAAATTCA
 A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATAGAA
NACAGGAAAT----
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G T A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGAAATAGAA---
-GAAAGTGAAAGT
 A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATAGAA
NNTGGAAANN---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGAAATAGAA
CCAAAAATAG--
 A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G T A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T