Information for 14-TTTGTAGGAGAAGGTA (Motif 24)

A G C T A C G T A C G T A C T G A G C T C G T A C T A G C T A G C G T A A T C G C G T A C G T A A C T G A C T G C G A T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C C G A T A C G T A T G C A C G T A G T C A G T C A C G T C T G A A G T C C G T A C G T A C T G A
p-value:1e-8
log p-value:-2.017e+01
Information Content per bp:1.915
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.5 +/- 22.0bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTAGGAGAAGGTA
ATTTGCATAACAAAG--
 A C G T A G C T A C G T A C G T A C T G A G C T C G T A C T A G C T A G C G T A A T C G C G T A C G T A A C T G A C T G C G A T C G T A
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTTGTAGGAGAAGGTA
ATTTGCATAACAATG--
 A C G T A G C T A C G T A C G T A C T G A G C T C G T A C T A G C T A G C G T A A T C G C G T A C G T A A C T G A C T G C G A T C G T A
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTAGGAGAAGGTA
NGCTTTCTAGGAAN-----
 A C G T A C G T A C G T A G C T A C G T A C G T A C T G A G C T C G T A C T A G C T A G C G T A A T C G C G T A C G T A A C T G A C T G C G A T C G T A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TTTGTAGGAGAAGGTA---
-----AAGATAAGATAACA
 A G C T A C G T A C G T A C T G A G C T C G T A C T A G C T A G C G T A A T C G C G T A C G T A A C T G A C T G C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

Stat4/MA0518.1/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TTTGTAGGAGAAGGTA
TTTCCAGGAAATGG--
 A G C T A C G T A C G T A C T G A G C T C G T A C T A G C T A G C G T A A T C G C G T A C G T A A C T G A C T G C G A T C G T A
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TTTGTAGGAGAAGGTA
TTTCCAGGAAA-----
 A G C T A C G T A C G T A C T G A G C T C G T A C T A G C T A G C G T A A T C G C G T A C G T A A C T G A C T G C G A T C G T A
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TTTGTAGGAGAAGGTA
---GAAAGTGAAAGT-
 A G C T A C G T A C G T A C T G A G C T C G T A C T A G C T A G C G T A A T C G C G T A C G T A A C T G A C T G C G A T C G T A
A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TTTGTAGGAGAAGGTA--
--NNAGGGACAAGGGCNC
 A G C T A C G T A C G T A C T G A G C T C G T A C T A G C T A G C G T A A T C G C G T A C G T A A C T G A C T G C G A T C G T A A C G T A C G T
A C G T A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.49
Offset:10
Orientation:forward strand
Alignment:TTTGTAGGAGAAGGTA-----
----------CAGGTAAGTAT
 A G C T A C G T A C G T A C T G A G C T C G T A C T A G C T A G C G T A A T C G C G T A C G T A A C T G A C T G C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:TTTGTAGGAGAAGGTA
------NNATAAGGNN
 A G C T A C G T A C G T A C T G A G C T C G T A C T A G C T A G C G T A A T C G C G T A C G T A A C T G A C T G C G A T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T