Information for 11-TCAGCTSGCAGBC (Motif 22)

A G C T A T G C C T G A A C T G A G T C A G C T T A C G T C A G A T G C C G T A A C T G A C T G A G T C
Reverse Opposite:
C T A G T G A C A G T C A C G T A T C G A G T C A T G C C T G A A C T G A G T C A G C T A T C G T C G A
p-value:1e-8
log p-value:-1.862e+01
Information Content per bp:1.757
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif32.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets64.7 +/- 26.1bp
Average Position of motif in Background43.9 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCAGCTSGCAGBC
-CAGCC-------
 A G C T A T G C C T G A A C T G A G T C A G C T T A C G T C A G A T G C C G T A A C T G A C T G A G T C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTSGCAGBC
NAHCAGCTGD-----
 A C G T A C G T A G C T A T G C C T G A A C T G A G T C A G C T T A C G T C A G A T G C C G T A A C T G A C T G A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCAGCTSGCAGBC
NAACAGCTGG-----
 A C G T A C G T A G C T A T G C C T G A A C T G A G T C A G C T T A C G T C A G A T G C C G T A A C T G A C T G A G T C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCAGCTSGCAGBC--
--AGGTGNCAGACAG
 A G C T A T G C C T G A A C T G A G T C A G C T T A C G T C A G A T G C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCTSGCAGBC
DCHCAGCAGGRGGCC
 A C G T A C G T A G C T A T G C C T G A A C T G A G T C A G C T T A C G T C A G A T G C C G T A A C T G A C T G A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCTSGCAGBC
NNGCAGCTGTC----
 A C G T A C G T A G C T A T G C C T G A A C T G A G T C A G C T T A C G T C A G A T G C C G T A A C T G A C T G A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCTSGCAGBC
CAGCAGCTGN-----
 A C G T A C G T A G C T A T G C C T G A A C T G A G T C A G C T T A C G T C A G A T G C C G T A A C T G A C T G A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCAGCTSGCAGBC
AACAGCTG------
 A C G T A G C T A T G C C T G A A C T G A G T C A G C T T A C G T C A G A T G C C G T A A C T G A C T G A G T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCTSGCAGBC
NNGCAGCTGTT----
 A C G T A C G T A G C T A T G C C T G A A C T G A G T C A G C T T A C G T C A G A T G C C G T A A C T G A C T G A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCAGCTSGCAGBC-
--AGGTGHCAGACA
 A G C T A T G C C T G A A C T G A G T C A G C T T A C G T C A G A T G C C G T A A C T G A C T G A G T C A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A